Flavobacteriaceae bacterium UJ101: UJ101_00015
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Entry
UJ101_00015 CDS
T04720
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fbu03016
]
UJ101_00015 (rnz)
Enzymes [BR:
fbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
UJ101_00015 (rnz)
Transfer RNA biogenesis [BR:
fbu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
UJ101_00015 (rnz)
Prokaryotic type
UJ101_00015 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
APD05568
LinkDB
All DBs
Position
complement(16335..17252)
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AA seq
305 aa
AA seq
DB search
MSFKLTILGCNAATPTSNSYPTAQYLQFAERYFLIDCGEGTQVQLRKYKAKFNKIHHVFI
SHLHGDHFFGLIGLISTFQLLGRVADLHIYGPKGIKEIIEVQLRLTQSYKTYTIYYHELE
SKESELIFKDDLVEVHTIPLKHRVYCNGYLFKEKLKKRKVNMEAVSQYSEIEICDYQNLK
NGKDYVLESGAVIQNEKLTLDPPKPLSYAFCSDTSFNPTIIPLIENVDLLYHEATFLEDK
KSLAQKTGHSTALEAAQIAQKSNVKKLILGHYSNRYSDLNDFKEEAQKVFENVVLGHEGK
EIVVK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaattaacaattttaggctgtaatgcagcaacacccacttctaattcttat
ccaactgcgcagtatttacaatttgcagaacgttattttttaatagattgtggtgaggga
actcaagttcagttaagaaaatataaagccaaatttaataaaattcatcatgtatttatt
tcacacttacatggagatcatttttttggattaattggtcttatttctacatttcaatta
ttaggaagagtagctgatttgcatatttatggccctaaagggattaaagaaattatagag
gttcaattgcggttgacccaatcttataaaacgtacactatttattatcatgaattagaa
tcaaaagaatcagaattaatatttaaagacgatcttgttgaagtacatacaattccttta
aagcatagagtctattgtaatggatatctttttaaagaaaagcttaaaaaacgtaaagtt
aacatggaagctgtttctcagtattctgaaattgaaatttgtgattatcaaaatttaaaa
aatggtaaagattatgttttggagagtggtgcagttattcaaaatgaaaagctaacatta
gatcctccaaaacctttgtcttatgcattttgttccgataccagttttaatcctacaata
attcccttaatagaaaatgtagatttgttatatcatgaagctacatttttagaagacaaa
aaaagtttagcacaaaaaacggggcattctacggcattagaagcagcccaaattgcacaa
aaatcgaatgttaaaaaactgattttaggacattattccaatcgatattcagatttaaat
gattttaaagaggaagctcaaaaagtttttgaaaatgtggtgttagggcatgaggggaaa
gaaattgtagtaaaatag
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