Flavobacteriaceae bacterium UJ101: UJ101_00119
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Entry
UJ101_00119 CDS
T04720
Symbol
rimO
Name
(GenBank) [Ribosomal protein S12] (aspartate(89)-C(3))-methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fbu03009
]
UJ101_00119 (rimO)
Enzymes [BR:
fbu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
UJ101_00119 (rimO)
Ribosome biogenesis [BR:
fbu03009
]
Prokaryotic type
ribosomal protein modification factors
UJ101_00119 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
APD05672
UniProt:
A0A1J0LHH0
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All DBs
Position
115891..117162
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AA seq
423 aa
AA seq
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MITLGCSKNLYDSEVIMGQLKANGKEVAHEAEEGNIVVINTCGFIDNAKEESVNTILQYA
EAKEKGTIDKLFVTGCLSERYKPDLEKEIPNVDQYFGTRDLPLLLKALGADYKHELIGER
LTTTPRHYAYLKISEGCDRTCSFCAIPLMRGGHISTPIENLVEEAKKLAKNGTKELILIA
QDLTFYGLDIYKKRRLGDLLKELVKVEGIEWIRLHYAFPTGFPEDVLEIMNQEPKICNYL
DIPLQHISDNILKSMRRGTSFEKTNRLLAEFRKKVPNIAIRTTLITGYPGESEEDFAILK
QWVKDQRFDRLGCFTYSHEENTHAHQLIDDVPDEVKKVRAAEIMELQEQISKELNQSKIG
KTYRCLFDRKEGDYFIGRTEFDSPDVDNEVLVNAENTYISIGEFCNIQIVDADEFDLFGV
IVD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgattaccttaggttgttcaaaaaacctttacgatagtgaagtgattatggggcaacta
aaagctaatggtaaagaagttgctcatgaagctgaagaaggaaatattgttgtaatcaat
acatgtggttttattgataatgcaaaagaagaaagtgttaatacaatattacaatacgca
gaagctaaggaaaaaggaactattgataaattatttgtaaccggatgtctttcagaacgc
tacaaacctgatttagaaaaagaaattccaaatgtagatcaatattttggtacacgcgat
ttacctttgttattaaaagctttaggagcagactataaacacgaacttattggagaacgt
ttaaccactactccacgtcattatgcttatctcaaaatatccgaaggttgtgatcgaacc
tgttctttttgtgcaattcctttaatgagaggaggtcatatttctactcctattgaaaat
ttagttgaagaagctaaaaaactagccaaaaatggtacaaaagaacttattttaattgct
caagatttaactttttatggtttagatatctataaaaaaagacgtttaggtgatctatta
aaagagctagttaaagtagaaggaattgaatggattcgattgcattatgctttcccaaca
ggttttccagaagatgttttagaaattatgaatcaagaacctaaaatttgtaattacttg
gacattcctttacagcatatttcagataatatcttgaagtctatgcgaagaggaacttca
tttgaaaaaacaaatcgtttgttggctgaatttcgtaaaaaagtacccaatatagccatt
cgtactactttaattacaggatatcctggagagagtgaagaagattttgctattttaaaa
caatgggttaaagatcaacgttttgatcgtttaggttgttttacctactctcacgaagaa
aacacacatgctcatcaattaatagatgacgttcctgatgaagtgaaaaaagttcgtgct
gcagaaattatggagctacaagaacaaatttctaaagaacttaatcaaagtaaaattggt
aagacttaccgttgtttgtttgatcgaaaagaaggtgactattttattgggcgaacagaa
tttgattctcctgatgtagacaatgaagttttagtaaatgcagagaatacctacatctct
attggtgagttttgtaatattcaaatagtcgatgcagacgaatttgatctatttggagta
atagtagattaa
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