Flavobacteriaceae bacterium UJ101: UJ101_00194
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Entry
UJ101_00194 CDS
T04720
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UJ101_00194 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbu03400
]
UJ101_00194 (priA)
Enzymes [BR:
fbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UJ101_00194 (priA)
DNA repair and recombination proteins [BR:
fbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UJ101_00194 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND3
Cas3-like_C_2
nSTAND6
AAA_30
ATPase_2
ATPase
RsgA_GTPase
AAA_22
NPHP3_N
PIF1
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
APD05747
LinkDB
All DBs
Position
209640..212087
Genome browser
AA seq
815 aa
AA seq
DB search
MFEEYFVDVILPLPLKGTFTYKLEEEEFNALTIGCRIAVPFGSKKIYTGLVYHLHQNKPE
LYKAKPIQQILDSAPIVTEKQIRLWEWISDYYMCSIGDVFRQALPSALKVNSETFIKRND
HPVDEKLTKEEGYILEILAKKSSVSVEELASTLDNRYILKIIKQLLDKNLIVIDEKLKQK
YVPKIENYVRFNEDLKNNKEAFSEAFLKLDRAPKQKEIVMRLLTLEAENKPIKASKIIKL
TNTSHGILNSLVKKNILNIYQLQTDRTYTEEQELQPIFSLSDAQEKAYQEIHQSFKENDI
SLLYGVTGSGKTEIYIQLIQDTLAEGKQVLFLLPEIAISTQLIYRLKQFFGNDVGYYHSK
FNNQEQVELWLKTFHNQYKILIGARSALFLPIENLGLIIVDEEHEGSFKQNQPNPRYNAR
DTALVWAKIHQAKTLLGSATPSLESYYNSKNGKYGFVELKQRYGNVLMPEIQIIDLQKAY
KKKEIQGHFSDILLNEIRDNLEQKKQIIIFQNRRGYAPVVECQTCGHTPHCPNCDVSLTY
HKVSHLLKCHYCGHTQAQPKFCPSCHGFNLDTKGLGTEQIEQELSLLFPNHKIGRMDADT
TKGKHGFEKIIHAFEAREIDILVGTQMVAKGLDFDNIGLVGILKADTLLNYPDFRAHERA
FQLMTQVAGRAGRKKDRGKVLIQSFNPEHNILQQISIYNYKEMAKEVLYERRQFVYPPFN
RMIILTLKHKDQVKLDVASNLLAQHLQKSFGEQLLGPETPPIARIKNLYHKRILIKLINP
KKIVSAKKYIEQILENFKTIKAYRSIQIIVDVDPY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaagaatattttgttgacgttatattacctttaccattaaaaggtacttttact
tataaattagaagaagaggaatttaatgccctaactattgggtgtagaatcgctgttcct
ttcggctcaaaaaaaatttatacaggattggtttatcatttacatcaaaataaacctgaa
ctttataaagctaaacccattcaacaaattcttgattctgctcctattgttacagaaaaa
caaattcgtttatgggaatggatttctgattattacatgtgttccattggagatgttttt
cgtcaagccttaccctcagctttaaaagtaaatagtgaaacttttatcaaacgaaatgat
catccagttgatgaaaaactaaccaaagaagaaggctatatcttagaaattctagcaaaa
aaatcaagtgtttcggttgaagaattagcttcaacattagataatcgatatatcctcaaa
ataataaaacaattattagataaaaatttaattgttattgatgaaaaactaaaacaaaaa
tacgttcctaaaattgaaaattatgtccgatttaatgaggatttaaaaaataacaaagaa
gctttttcagaagcttttctaaaactagatcgagcaccaaaacaaaaggagatcgttatg
cgattgttaactttagaagctgaaaacaaacccattaaagcttctaaaatcattaaactc
actaatacctcacacggtattctcaacagtttagttaaaaagaatattctcaacatttat
caattacaaaccgatagaacatacacagaagaacaagaattacaacctattttttctcta
tctgatgctcaagaaaaagcatatcaagaaatccatcaatcttttaaagaaaatgacatt
tcccttctatatggcgttacaggaagtggaaaaacagaaatttatattcaattaattcaa
gacactttagcagaaggtaaacaagttttatttttattacccgaaattgccatatcaacc
caattaatttaccgtttaaaacaattttttggtaatgatgtaggttattatcattcaaaa
ttcaataatcaagaacaagttgagttatggcttaaaacatttcataatcaatataaaatt
ttaatcggagctcgttctgctttatttttacctatagaaaatttaggtttaattattgtg
gatgaggaacatgaaggaagttttaagcaaaatcaacccaaccctcgctacaatgctcgt
gatacagctttggtgtgggctaagattcaccaagccaaaactttacttggatctgcaaca
ccttctttagaaagttactacaatagtaaaaacggaaaatatggttttgttgaattaaaa
caacgttatggaaacgttttaatgccggaaattcaaattattgatttacaaaaagcatat
aaaaagaaagaaattcaagggcatttttctgatattttattgaatgaaattcgagacaat
ttagagcaaaaaaaacagataattattttccaaaaccgtagaggttatgctcccgttgtt
gaatgtcaaacatgtgggcacactccacattgccctaattgtgatgtttctttaacctat
cacaaagtatctcacctattaaaatgtcattactgtggtcatacgcaagcacaacctaaa
ttttgtccttcatgtcatggttttaacctagataccaaaggtttgggaactgaacaaatt
gagcaagaattaagtcttttatttcccaaccataaaattggacgaatggatgctgataca
acaaaagggaaacatggttttgaaaaaatcatacatgcttttgaagctagagaaattgac
attctagttgggactcaaatggttgcgaaaggattggattttgataatattggattagta
ggtattttaaaagccgatactcttttaaattatccagattttagagctcatgagcgtgcc
tttcaacttatgacacaagttgcaggaagagctggtagaaaaaaagatcgaggaaaagtt
ttaattcaatcttttaatcctgaacacaatattttacaacaaatttcgatatataattat
aaggaaatggcaaaagaagtgctctatgaacgacgccaatttgtttatcctccttttaat
cgaatgattatcttgactttaaagcataaagatcaagtaaaattagatgttgcttctaat
ttattagctcaacatttacaaaaatcatttggagaacaattattagggcctgaaacgcct
cctattgctcgaataaaaaacctgtatcataaaaggatattaattaaattaatcaatcct
aaaaaaattgtatctgctaaaaagtatattgaacaaattttagaaaattttaaaacaata
aaagcttacaggagcatccagattatagtggatgttgatccgtattaa
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