Flavobacteriaceae bacterium UJ101: UJ101_00613
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Entry
UJ101_00613 CDS
T04720
Symbol
pnp|PNPT1
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UJ101_00613 (pnp|PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbu03019
]
UJ101_00613 (pnp|PNPT1)
03016 Transfer RNA biogenesis [BR:
fbu03016
]
UJ101_00613 (pnp|PNPT1)
Enzymes [BR:
fbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UJ101_00613 (pnp|PNPT1)
Messenger RNA biogenesis [BR:
fbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UJ101_00613 (pnp|PNPT1)
Transfer RNA biogenesis [BR:
fbu03016
]
Prokaryotic type
tRNA degradation factors
UJ101_00613 (pnp|PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
APD06152
UniProt:
A0A1J0LIV8
LinkDB
All DBs
Position
complement(689962..692103)
Genome browser
AA seq
713 aa
AA seq
DB search
MKPNAIMETIQLPDGREITMETGLLAKQADGSVVIRMGKTVLLATVVAAKEAKPGTDFLP
LTVDYREKFAAAGRYPGGFFKREARPSSEEILTMRLVDRVLRPLFPKDYHCEVQVMIQLM
SHDEDVMPDALAGLAASAALTITDIPFEGPISEVRVARVDGEFIVNPSMAQLELADIDIM
IGASADSVAMVEGEMKEISEEEMIQAIKVGHEAIKAQCEAQLRLREKVGVTTVREYEEEE
TDEAIAKKVHDYAYQKVYDVAKAGSAKHERSEKFAQIKEEVEALFTEEELEEVGHLVSKY
YHKTNKEAVRNLTLDEGLRLDGRKTTEIRPIWSEVNYLPSTHGSAVFTRGETQALATVTL
GTSREANMIDLPTYQGEERFYLHYNFPPFSTGEARPLRGTSRREIGHGNLAQRALKGMIP
DDCPYTVRVVSEILESNGSSSMATVCAGTLSLLDAGIQLKKSVSGIAMGLISDEETGKFA
VLSDILGDEDHLGDMDFKVTGTEDGITACQMDIKIKGLSYEVLGQALSQARDGRLHILGK
LNETIDTPNNSVKAHAPKMIKMEIAKDFIGAVIGPGGKVIQELQKETGTTIVIEEVGEFG
QIEILGTDQEGIDKAIATIDEIAFTPEVGSIYEGTVVSIKDFGAFVSLAKGTEGLVHISE
LRHERVKKVEDILKVGDKIDVKLLGYDKGKMKLSHKVLLPKPERKPKEENKAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaatgcaattatggagaccattcaattacctgatggtcgtgaaattacaatg
gaaacaggtcttttagctaaacaagctgatggatccgtagtcattcgtatggggaaaacc
gttttattagcgacggtagtagctgctaaagaagcaaaaccaggaaccgattttttaccc
ttaacggtagattatcgtgaaaaatttgcagcagcaggtcgttatccaggaggattcttt
aaaagagaagcccgcccaagtagtgaagaaattttaacaatgcgtttagtggaccgtgtt
ttacgtccattattcccaaaggattatcactgtgaagtacaagtgatgattcaattaatg
tcacatgacgaagatgtaatgcctgatgctttagcaggtttagcagcttcagcagcttta
actattacagatattccttttgaaggacctatttctgaagtacgtgtggctcgtgttgat
ggagaatttattgttaatccaagtatggctcaattggaattagctgatattgatattatg
atcggtgcttctgctgattcagtggcaatggttgaaggagaaatgaaggaaatttctgaa
gaagaaatgattcaggctattaaagtaggtcatgaagccattaaagcacaatgtgaagct
cagttacgtttacgtgaaaaagtaggtgtaactactgtacgtgaatatgaagaagaagaa
acagatgaagctattgctaaaaaagtacatgattatgcttaccaaaaagtatatgatgta
gcaaaagcaggttctgctaaacatgaacgttctgaaaaatttgcacaaattaaagaagaa
gtagaggcattatttacagaagaagaactagaagaagtaggtcatttagtatcgaaatac
tatcataaaacgaataaagaagcagttcgtaatctaactttagatgaaggattacgttta
gatggtcgtaaaacaacagaaattcgtccaatttggtctgaagtaaattatttgccttca
acacatggttctgcagtatttacacgtggagaaacacaagctttagctacagtgacacta
ggaacttctcgtgaagctaatatgattgatttacctacttaccaaggagaagaacgtttt
tatttacactataatttcccaccattttcaactggagaagcacgcccattaagaggaact
tctcgtcgtgaaattggtcatggtaatttagctcaaagagcgttaaaaggaatgattcct
gatgattgtccttatacagttcgtgtagtttctgagattttagaatcgaatggttcttca
tcaatggctactgtttgtgcaggaaccttatctttattagatgcaggtattcagttgaaa
aaatcggtttcaggtattgcgatgggattgatttctgatgaagaaacagggaaatttgca
gtactttctgatatcttaggagatgaagatcatttaggtgatatggattttaaagtaaca
ggtactgaagatggtattacagcttgtcaaatggatatcaaaatcaaaggattatcatat
gaagttttagggcaagcattatctcaagctcgtgacggtagattgcatatcttaggaaaa
ttaaatgagacgattgatacacctaataatagtgtgaaagctcatgctcctaagatgatt
aaaatggagattgctaaagactttatcggtgctgttattggacctggaggaaaagtaatt
caagaattacaaaaagaaacaggaacaactattgtgatcgaagaagtaggtgaatttggt
cagattgaaatcttaggaacagatcaagaaggaattgataaagcgattgcaactattgat
gagattgcgtttactcctgaagttggaagtatctatgaaggaacagtagtttcgattaaa
gattttggagcatttgtttcgcttgccaaaggaactgaaggtttagttcatatttcagaa
ttacgtcatgagcgtgttaaaaaagtagaagatattttgaaagttggcgataagattgat
gtgaagttgttagggtatgataaagggaaaatgaaactttctcataaagttttattacca
aaacctgaacgtaaaccaaaagaagaaaataaagcagaatag
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