Flavobacteriaceae bacterium UJ101: UJ101_00620
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Entry
UJ101_00620 CDS
T04720
Symbol
DPO1|polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu03030
DNA replication
fbu03410
Base excision repair
fbu03420
Nucleotide excision repair
fbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UJ101_00620 (DPO1|polA)
03410 Base excision repair
UJ101_00620 (DPO1|polA)
03420 Nucleotide excision repair
UJ101_00620 (DPO1|polA)
03440 Homologous recombination
UJ101_00620 (DPO1|polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbu03032
]
UJ101_00620 (DPO1|polA)
03400 DNA repair and recombination proteins [BR:
fbu03400
]
UJ101_00620 (DPO1|polA)
Enzymes [BR:
fbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UJ101_00620 (DPO1|polA)
DNA replication proteins [BR:
fbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UJ101_00620 (DPO1|polA)
DNA repair and recombination proteins [BR:
fbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UJ101_00620 (DPO1|polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UJ101_00620 (DPO1|polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
EF-hand_13
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
APD06159
LinkDB
All DBs
Position
696641..699490
Genome browser
AA seq
949 aa
AA seq
DB search
MTQEHAKNDKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAIMGFCNSMIEILKKENP
THIAVVFDVGKSTVRTEQYPEYKANRDETPEAIKIAVPYIQEIIKAFHIPILYKEGYEAD
DVIGTLAKKAEKAGFTTYMMTPDKDFGQLVSENIFMYRPAARGNGPEIWGIPEIQEKFGV
ERPEQVIDFLGMMGDSVDNIPGLPGVGEKTAKKYLAEFGSLENLLAHTDQLKGKAKEKIE
ANKELGILSKQLATIILDVPIEFDEKSLVMDPPDLEKIQEIFQELEFRRMAEQVTRHFSQ
KTANENLKEAFVTQSAPTKTSGKSEQMSLFGNDETSLTLPQETHTGYKTVENSHALYQYV
DTKTGRKLLLEKILQQKEVCFDTETTSLNTFEAEIVGLAISFEKNTGYYITLPENQKETT
SILNEFKPFFEDPTIIKIGHNLKYDLKVLANYQIEVKGNLFDTMIAHYLINPDMRHGMDI
LAETYLNYQPIKIETLIGKKGKNQLSMRDVEIEKQTPYACEDADITLQLKEIFEKKFTEE
IKKLFYDIEMPLMRVLIQMELNGISLDSESLAKLSKELEEDSTLLEKSIYEQAGEEFNIA
SPKQLGPILFEKLAISKKAKKTKTGQYSTSEDVLSKLKNEHSIVANILNYRQVNKLKSTY
VDALPKEVNPKTNRIHTTFGQTVAATGRLSSNNPNLQNIPIRTKRGQEVRKAFIPKDQNH
ILIAADYSQIELRLIAEIAQEPNMTQAFINGEDIHASTAAQIFDVDIKNVTREQRSQAKT
VNFGIIYGVSAFGLSEQTGLSRSDSKKLIDAYYETYPTLKEFMAKQVEFARQQGYVETIL
GRRRYLKDINSSNAVVRSHAERNAINAPIQGSAADIMKLAMIEVQQHLLQENLESKLLLQ
VHDELVLEAPLKEKDALKSNLKNIMEQVVKTQIPLITEVEEGKNWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaacatgccaaaaatgataaacgcttatttttactcgatgcatacgcctta
attttcagaggttactatgcctttattaaaaatccacgaatcaattcaaaaggattaaat
acctctgctataatgggattttgtaattctatgattgaaatcttaaaaaaagaaaatcct
actcatatagcggtcgtttttgatgttggaaaatctacagttcgaaccgaacaataccct
gaatataaagccaatcgtgatgaaactcctgaggctattaaaatagcagttccctacata
caagaaattataaaagcctttcatattcctatattgtataaagaagggtacgaagcagat
gatgtaattggaactttagctaaaaaagcagaaaaagccggttttacaacctatatgatg
acacctgataaggattttggtcaattagttagtgaaaacatctttatgtatcgacctgca
gcaagaggtaacggtcctgagatatggggtattcctgaaatccaggaaaaatttggagtt
gagcgtcccgaacaagttattgattttttaggtatgatgggggattctgttgataatatt
cccggtttacctggagttggagaaaaaacagccaaaaaatacctagcagaatttggatca
ctagaaaatttattagctcataccgatcaattaaaaggaaaggctaaagaaaaaattgaa
gccaataaagaacttggaatcctttctaaacaacttgctaccattatcttagatgttcct
atcgagtttgatgaaaaatcactcgttatggatcctcctgatttggaaaaaattcaagag
atttttcaagaattagagtttagaagaatggctgaacaagtaacccgtcattttagtcaa
aaaacagctaatgaaaatttaaaagaagcttttgttacccaatcagctcctactaaaaca
tcaggcaaaagcgaacaaatgtctctttttggaaatgatgaaacttctttaaccttacca
caagaaacccatacaggatataaaactgtagaaaattctcatgcattataccagtatgta
gataccaaaacaggtagaaaattacttctagaaaaaatcttacaacaaaaagaagtctgc
tttgataccgaaacaactagtttaaatacttttgaagcagaaattgtagggttagccatt
tcctttgaaaaaaacacaggatattatatcactttacctgaaaatcaaaaagaaacaact
tctattttaaatgaatttaaacctttctttgaagatcctactatcatcaaaataggtcat
aacttaaaatatgatttaaaagtattagccaattatcaaattgaagtaaaaggaaatctt
tttgataccatgattgcacattacctaattaaccctgatatgaggcatgggatggatatc
ttggctgaaacatacttaaattatcaacccattaaaattgaaactttaattggaaaaaaa
gggaaaaatcaactttctatgcgtgatgttgaaattgagaagcaaacaccttatgcatgt
gaagatgctgatattacattacaattaaaagaaatttttgaaaaaaagtttactgaagaa
ataaaaaaactattttatgacattgaaatgcctctcatgcgtgttttaatacagatggaa
ttgaatggtatttcactagattcagaatctttagcaaaattatctaaagaattagaagaa
gatagcacattattagaaaaatctatttacgagcaagctggtgaagaattcaatattgct
tctcctaaacaattaggacctattttatttgaaaaactagccatttctaaaaaggcaaag
aaaaccaaaacagggcaatattctacatcagaagatgtattatcaaaacttaaaaatgaa
cattctattgtagcaaacattttaaattatcgacaagtcaataaattaaaatcaacttat
gtcgatgccttacctaaggaggttaatcctaaaaccaatcgaattcataccacttttgga
caaacggtcgctgcaactggaagattaagttctaataatcctaatttacaaaacataccc
attcgcacaaaacgagggcaagaagtaagaaaagcctttattccaaaagatcaaaatcat
atacttattgcagctgattattctcaaattgaactacgtttaattgctgaaatagctcaa
gaacccaatatgacacaagcttttatcaatggagaggatatccatgcttcaactgctgca
caaatttttgatgttgatattaaaaatgtaacacgtgaacaacgttcacaagccaaaaca
gtaaattttggaattatttatggtgtttctgcttttggattaagtgaacaaacaggttta
tcacgaagtgattccaaaaaactaattgatgcatactatgaaacgtatcctactttaaaa
gaattcatggcaaaacaagtagaatttgctcgacaacaaggttatgttgaaactatttta
ggtagacgtcgttatttaaaggacattaattcttctaacgctgtagttcgaagtcatgcc
gaacgaaatgcaatcaacgctcctattcaaggaagtgctgctgacattatgaagctagct
atgattgaagtacaacaacatcttttacaagaaaatcttgaatcaaagttattattacaa
gtacatgatgaacttgtattagaagcccctttaaaagaaaaagatgccttaaaatctaat
ttgaagaacattatggagcaggttgtgaaaactcaaataccacttattaccgaagttgaa
gaaggtaaaaactggttagaagcacattaa
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