Flavobacteriaceae bacterium UJ101: UJ101_00639
Help
Entry
UJ101_00639 CDS
T04720
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UJ101_00639 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbu03400
]
UJ101_00639 (xthA)
Enzymes [BR:
fbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
UJ101_00639 (xthA)
DNA repair and recombination proteins [BR:
fbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
UJ101_00639 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
FucT_N
UvsY
Motif
Other DBs
NCBI-ProteinID:
APD06178
LinkDB
All DBs
Position
complement(722916..723677)
Genome browser
AA seq
253 aa
AA seq
DB search
MKIISYNVNGIRAALKKGFDEWLKVADPDVICLQETKAMKEQVEVSIFENLGYKHYWYSA
QKKGYSGVAIFTKKEPKHIEYGTGIETMDFEGRNIRIDFEEVSIMSMYLPSGTNMDRLEF
KLNYMEEILQYLTELRKTIPNLVVCGDYNICHEAIDIHDPVRNAKVSGFLPVEREWLTQF
IESGFIDSFRHFNKEPDQYSWWSYRANARNNNKGWRIDYNMVTEPLKDKMTRATILPEAK
HSDHCPIVVELDL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataattagttataatgtaaatggaattcgggctgcattgaaaaaaggatttgat
gaatggttaaaagtggcagaccctgatgtaatttgtctacaagagaccaaggcgatgaaa
gaacaagtagaggtctctatttttgagaacctaggttacaaacattattggtattctgct
caaaagaaagggtatagtggtgttgctatttttacaaaaaaagaacctaagcatatcgaa
tatggtactggaattgagacgatggattttgaaggacgtaatattcgaattgattttgaa
gaagtttctattatgagtatgtatttgccctcaggaacgaatatggatcgtttggaattt
aaattaaattacatggaggagattttacagtatttaacagagctacgtaaaacgataccc
aatttagtggtttgtggagactataatatttgtcatgaagcaattgatattcatgatccg
gttcgaaatgcaaaagtttcagggtttttacctgtggagagagaatggttaacgcaattt
atagaaagtggttttatagatagttttcgtcattttaacaaagagcctgatcagtatagt
tggtggagttatcgtgcgaatgctcgaaataataataaaggttggcgtattgattataat
atggttacagaacctttaaaagataaaatgactcgagctaccattttgcctgaagcaaaa
cattcagatcattgtcctatcgtggtagagttagatttataa
DBGET
integrated database retrieval system
