Flavobacteriaceae bacterium UJ101: UJ101_00950
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Entry
UJ101_00950 CDS
T04720
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbu03032
]
UJ101_00950 (gyrB)
03400 DNA repair and recombination proteins [BR:
fbu03400
]
UJ101_00950 (gyrB)
Enzymes [BR:
fbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UJ101_00950 (gyrB)
DNA replication proteins [BR:
fbu03032
]
Prokaryotic type
DNA Topoisomerases
UJ101_00950 (gyrB)
DNA repair and recombination proteins [BR:
fbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UJ101_00950 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
APD06481
LinkDB
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Position
complement(1085992..1087938)
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AA seq
648 aa
AA seq
DB search
MSEQQNNYSADSIQALEGIEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMAGYCDT
IGVIINEDNSITVNDNGRGIPVGMHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLHGV
GVSCVNALSNDLKATVYREGKIWQQEYKRGKAEYPVKTIGDSDKNGTEVTFWPDDTIFTQ
TTEYNYDTLASRMRELAFLNKGITISITDKRRKDEEGNFIMETFQSDEGLKEFVRFLDET
REPLIEEVVHFEGEKNGVPVEVALLYNTSYSENIHSYVNNINTHEGGTHLSGFRRGLTHT
LKKYADNSGMLDKLKFDIAGDDFREGLTAIVSVKVSEPQFEGQTKTKLGNREVSASVSQA
VSEMLTDYLEEHPDDAKTIVQKVILAAQARHAAAKAREMVQRKSPMVGGGLPGKLADCAS
SDPEICELFLVEGDSAGGTAKQGREREYQAILPLRGKILNVEKAMQHKVFENEEIRNIFT
ALGVTIGTEEDSKALNLEKLRYKKIVIMCDADVDGSHISTLILTFFFRYMRELVEAGHVY
IAQPPLYLVKKGSKQVYAWSDEQRDQIVNELTNGEGKGASIQRYKGLGEMNADQLWETTL
NPEHRTLRRVVIDSGTEADRVFSMLMGDEVPPRREFIEKNAIYANIDI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaacaaaataattattcagcagatagtattcaagctctagaagggattgaa
catgtgagaatgcgtccctcgatgtatattggagatgtaggagtaagaggtttacatcat
cttgtatatgaggtggttgacaactctattgatgaggctatggcgggttattgcgatact
attggagttattattaatgaggataattccattaccgtaaacgataatggacgtggtatc
cctgtaggaatgcataaaaaagaaggtgtttccgctttagaagtggttatgactaaaatt
ggtgcaggaggtaaatttgataaagattcttataaagtttcaggagggcttcacggtgtt
ggagtttcttgtgtaaacgctttatcaaatgacttaaaagctacagtttatcgtgaaggt
aaaatttggcaacaagaatataaaagaggaaaggcagaataccctgtaaaaacaattggt
gattctgataaaaacggtaccgaagtaacattctggccagatgatactatttttacgcaa
acgacagaatataattatgatacgttagcttctcgtatgcgagaattagctttcttaaat
aagggaattaccatttctattaccgataaacgtcgtaaagatgaggaaggtaattttatc
atggagacttttcaatcagatgaaggtttaaaagagtttgttcgttttttagatgaaacc
cgtgaacctttaattgaagaagtagttcattttgaaggagaaaaaaatggtgttccagta
gaagtagctttgttatataatacttcttactcagaaaatattcattcgtatgtgaataat
attaatacacatgaaggaggaactcatttatcaggtttccgtcgtggattaacgcataca
ttaaaaaaatatgcagacaactcaggaatgttagacaaactaaagtttgacattgcagga
gatgatttccgcgaaggattaacggctattgtttctgtaaaagtttcggaacctcaattt
gaaggacaaactaaaacaaaattaggtaatcgtgaagtttcagcatctgtttctcaagca
gtttccgaaatgttaacggattatttagaagaacatcctgatgatgcaaaaaccattgta
caaaaagtaattttagctgctcaagctcgtcatgctgctgctaaagctcgtgaaatggta
caacgtaaatctccaatggttggaggaggtttaccaggtaaactagcagattgcgcttct
tcagatcctgaaatttgtgaattatttcttgtagagggagattctgcaggaggtactgca
aaacaaggtcgtgaacgtgagtatcaggctattctaccattgagaggtaaaattttaaac
gttgaaaaagcaatgcaacataaagtatttgaaaacgaagaaattcgaaatatttttact
gcattaggagtaacaattggtactgaagaagatagtaaggcattaaatttagaaaaatta
cgttacaaaaaaattgtcatcatgtgtgatgccgatgtagatggaagtcatatttctacc
ttaattctaacattctttttccgttatatgcgtgaactagttgaagctggacacgtatac
atagctcaacctcctttatacttagttaaaaaaggatctaaacaggtatatgcatggagt
gatgaacaacgtgaccaaattgtaaatgaattaactaatggcgaaggaaaaggagctagt
attcaacgatataaaggtcttggagaaatgaatgctgaccaattatgggaaacgacttta
aatccagaacatcgtacacttcgccgagtagtaattgatagtggaactgaagcagatcgt
gtattttctatgttgatgggagacgaagtacctcctcgtagagaattcattgagaaaaat
gcaatttatgccaatattgatatttaa
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