Flavobacteriaceae bacterium UJ101: UJ101_02037
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Entry
UJ101_02037 CDS
T04720
Symbol
rep
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu03420
Nucleotide excision repair
fbu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UJ101_02037 (rep)
03430 Mismatch repair
UJ101_02037 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbu03400
]
UJ101_02037 (rep)
Enzymes [BR:
fbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UJ101_02037 (rep)
DNA repair and recombination proteins [BR:
fbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UJ101_02037 (rep)
MMR (mismatch excision repair)
Other MMR factors
UJ101_02037 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
Cas_Cas4
AAA_30
UvrD_C_2
AAA_11
DUF2800
zf-MYND
SWIRM-assoc_2
AAA_14
DEAD
Motif
Other DBs
NCBI-ProteinID:
APD07541
UniProt:
A0A1J0LPX8
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All DBs
Position
2276969..2279878
Genome browser
AA seq
969 aa
AA seq
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MTSRNNKNQQLAIDTAEGPVLIIAGPGAGKTRTLVERTVNLIQKGTKPEEILVATFTEKA
AKELVTRISNRLLELEVKVNLNEMYIGTLHSIFLRFLEEYREFTRLKRSYRLLDQFDQKF
FLYQNMRDFVAIENSEEILGGHNLSSWHKADKLINYINKVGEENLDYQQLISSEDANVSV
IGEFYKLYIEKLNEENALDFSSIQSETYDLIKNNQNVLDEIQSKIKYFMIDEYQDTNTIQ
EKIVLLLASKNNNICVVGDDDQGLYRFRGATIRNILEFPDNFQKGICKEIKITTNYRSHP
EIINFYNNWMDELDWTKEGKTFRFDKTIVPREDNFIKAPTVIKVSSEASLHHYFEEVYQF
IIELENKRVLKDRNQIAFLFKSVKGERVNALAEYLEERGIKVFSPRSALFFEREEIRLLI
GAIVFIFPDLFDVLAWSDTAKLDIWKYYDSCKRQFGNAIRQDLEKHKALLQWCQDKAKRH
LTLTEGTNYSLAALVYQLLEFSMFSDCLNVDLKANKTDLRASYNIALLTKLLWKFEYLYN
VTVITPENKEKVLQNLFNRFFRFLNDGGLEEFEDFDEYAPSGCVSFMTIHQSKGLEFPIV
FVGMPTNRQGPRKQYDDVDELLQEEYYHKPPFEPLEEVKYYDFWRLYYTAFSRPQNVLVL
GNYETRNAKGIVNSPHKLLQDSYAKAPHWRNENVDITKYNLAEIKPTNIKHEYSFTSHIL
LYENCPLQYKFYKELEFTEVRTGGVLGGQLLHQTIEDIHKAVLKDEVHTLTNENIEAWFN
TNYHLLTKQQKSYLHLPQRKALLKQILNYRDKNSNDWDKIVEAEVDVSLVKEDYILKGTI
DLIRGENNTVELIDFKSGSKPDVNATDELTRGLLDRYRRQLEVYAHLVEERTGHKVSKMH
LHYPKEENSSPYITFNKNEHTISKTVESFDEIVEKIESKNFDNSHIVKNDKQCGECDMRF
YCNPKHNRN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtagaaataataaaaatcaacaacttgcaatagatactgctgaaggtcctgtt
ttaattatagcaggtccaggtgcaggtaaaactagaacactagtagaaagaacagttaat
cttattcaaaaaggaactaaaccagaagaaattttagttgcaacatttactgaaaaagct
gctaaagaattagttactcgtatttctaatagactgctagaattagaggttaaggtaaat
cttaatgaaatgtatattggtacattgcattcaatattcttaagatttctagaagaatat
agagaatttactagattaaaaagaagttatagattactagaccaatttgaccagaaattt
ttcttgtatcaaaatatgagggattttgtggcaattgaaaattcagaagaaattttagga
ggacataatttatctagttggcataaggcagataaattaattaactatataaataaagtt
ggagaggaaaatttagactatcaacaactaattagttcagaagatgccaatgtttcagtt
attggtgagttctataaactatatatagaaaaactaaatgaagaaaatgcattagatttt
tcttcaatccaaagtgaaacctatgacctaataaaaaataatcaaaatgtattagatgag
atacagtcaaaaataaaatactttatgattgatgagtatcaagatactaacactattcaa
gagaaaatagtattgcttctagcttcaaaaaacaataatatttgtgtcgtaggtgatgat
gaccaagggttatacagatttagaggtgctacaattagaaatatcttagaatttccagac
aactttcagaaaggaatttgtaaggaaattaaaataacaacaaattataggtcacatcca
gaaattataaatttttataataattggatggatgagttggactggactaaagagggtaaa
acatttaggtttgacaaaacaattgtgcctcgtgaagacaattttattaaagcacctaca
gtaattaaagtatctagtgaagcatcattgcaccattattttgaggaagtatatcaattt
ataatagaacttgaaaataaaagagttttaaaagatagaaatcaaattgcatttttattt
aagtctgtaaaaggtgaaagggttaatgctctagcagaatatttggaagaaagaggaatt
aaagtgtttagtccacgttctgcactattttttgaaagagaagaaattagattattaatt
ggtgctatagtttttatttttccagatttatttgatgttttagcttggagtgatactgct
aaactagatatctggaaatattatgattcttgtaaaaggcaatttggtaatgcaataaga
caagacttagaaaaacataaggctttattgcaatggtgtcaagataaagctaaaagacat
ctcactttaactgaaggtacaaattatagtctagctgcattggtgtatcagctattagaa
ttttcaatgttttcagattgccttaatgtagatttaaaagctaacaaaacagacctaaga
gcttcttataatatagctttacttacaaagttactttggaagtttgagtatctatataat
gtaactgtaataacacctgaaaataaggagaaagttctccaaaatctattcaatagattt
ttcagatttttaaatgatggtggtttagaggagtttgaagattttgatgaatatgctcca
tctggatgtgtatcttttatgactattcatcaatctaaaggtttagagtttcctattgta
tttgttggtatgcctactaatagacaaggtccaagaaaacaatatgatgatgtagatgag
ttactgcaagaagaatactaccacaaaccaccttttgagcctttagaagaagtaaaatat
tatgatttttggaggttgtattatactgcattttctagacctcaaaatgtattggttcta
ggcaactacgaaacaagaaatgccaaaggaatagttaattcacctcataaattactacag
gatagttatgcaaaagcaccacattggagaaatgaaaatgtagatattacaaagtataat
ttggcagaaattaagcctactaatataaaacatgaatattcttttacttctcatatttta
ctttatgaaaactgccctttacaatataagttctataaggaattagagtttacagaagta
agaactggaggtgttttaggtggacaattgctacaccaaactatagaagacattcataaa
gctgtacttaaagatgaagtacatacattaactaatgaaaatattgaggcttggtttaat
actaattaccatctactaactaaacagcaaaaatcttatttacatttaccacagagaaaa
gcactgctgaaacaaattttaaactatagagacaagaatagtaatgattgggacaagatt
gttgaagctgaagttgatgtttcacttgttaaagaagattatatattaaaaggtacaata
gacctcattagaggagaaaataacacagtagaactcatagactttaaatctggaagcaaa
ccagatgtaaatgctacagatgaactcacaagaggtttattagacaggtacagaagacaa
ctagaggtttatgcacatttagttgaagaaagaacaggacacaaggtaagtaagatgcat
ctgcattaccctaaagaggaaaatagtagtccttatatcacatttaataaaaatgaacat
actattagtaagactgtagaatcttttgatgaaatagttgaaaaaatagagagcaaaaac
tttgacaactctcatattgttaaaaatgacaaacaatgtggtgaatgtgatatgaggttt
tactgcaacccaaaacataatagaaattaa
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