KEGG   Felis catus (domestic cat): 101081079
Entry
101081079         CDS       T02385                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
  KO
K10610  DNA damage-binding protein 1
Organism
fca  Felis catus (domestic cat)
Pathway
fca03420  Nucleotide excision repair
fca04120  Ubiquitin mediated proteolysis
fca05161  Hepatitis B
fca05170  Human immunodeficiency virus 1 infection
fca05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101081079 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101081079 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101081079 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101081079 (DDB1)
   05161 Hepatitis B
    101081079 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fca04121]
    101081079 (DDB1)
   03400 DNA repair and recombination proteins [BR:fca03400]
    101081079 (DDB1)
Ubiquitin system [BR:fca04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     101081079 (DDB1)
DNA repair and recombination proteins [BR:fca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101081079 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101081079 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 101081079
NCBI-ProteinID: XP_003993471
Ensembl: ENSFCAG00000029716
LinkDB
Position
D1:complement(105188524..105217785)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacatcagccgaagacctgaacctgttgattgccaaaaacacgagattagag
atctatgtggtcaccgctgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgctgtcatggagcttttcaggcccaagggggagagcaaggacctcctgtttatcctg
acagctaagtacaatgcctgcatcctggagtacaagcagagcggcgagagcattgatatc
ataacacgagcccatggcaacgtccaggaccgtattggccgcccctcagagactggcatc
attggcattattgaccccgagtgccgcatgattggcctgcgactctatgatggccttttc
aaggttattccgctagaccgggacaataaagagctcaaggcctttaacatccgcctcgag
gagttgcatgtcatcgacgtcaagttcttatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcatgtgaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaacgtagaagctgaggcttccatggtgatt
gcagtcccggagccctttggaggggccatcatcattggacaggagtcgatcacctatcac
aacggtgacaaatacctggcgattgcccctcctatcatcaagcaaagcacgatcgtgtgt
cacaatcgtgtggaccccaatggttcccgctatctgctgggagacatggaaggacggctc
tttatgctgctcttggagaaggaggagcagatggacggcaccgtcaccctcaaagatctc
cgcgtggagctccttggagagacctctatcgccgaatgcttgacatacctcgataatggt
gttgtgttcgttgggtctcgcctcggtgactcccagcttgtgaagctcaatgttgacagc
aacgaacaaggctcctatgtagtggccatggaaacctttactaatttgggacccattgtg
gacatgtgcgtggtggacctggagagacaggggcagggacagctggttacttgctctggg
gctttcaaggaaggttccttgcggatcatccgaaatggaattggaatccacgagcatgcc
agcattgacttaccaggcatcaaaggtctgtggccgctgcggtctgatcctaaccgggag
actgatgacactctggtgctctcttttgtgggccagacaagagttctcatgttgaacgga
gaggaggtggaggaaaccgaactgatgggtttcgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcagcaacttatccagatcacatcagcatctgtgaggttggtctct
caagaacccaaagctctggtcagtgagtggaaggagcctcagggcaagaacatcagcgtg
gcctcctgcaacagcagccaggtggtggtggccgtgggaagggccctctactacctgcag
atccaccctcaggagctccggcagatcagccacacagagatggaacacgaagtggcctgc
ttggacatcaccccactgggggacagcaacgggctgtcccctctttgtgccattggcctg
tggacagacatctctgcacgtatcttgaagctgccctcttttgagctactgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacttttgagagcagccac
tacctcctttgtgccttgggagacggggcacttttctacttcgggctcaacattgagacg
ggcctgttgagcgatcggaagaaggtgactctgggcacccagcccacggtattgaggact
ttccgttctctctctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtcaactacatgtgt
cccctcaactctgatggctatcctgacagcctggcactggccaacaatagcaccctcacc
attggcaccatcgacgagatccagaagctgcacattcgcacggtccccctctacgagtcc
cccaggaagatctgctatcaggaagtgtcccagtgcttcggggtcctttctagccggatt
gaagtccaggacacgagtgggggcaccacggccctgaggcccagtgccagcacccaggcc
ctgtccagcagcgtcagctccagcaagctgttctccagcagcacagcgcctcacgagacc
tcctttggggaagaggtggaggtgcacaacctcctcatcatcgaccagcacaccttcgaa
gtgcttcatgcccaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaag
ctgggcaaagaccccaacacgtacttcatcgtgggcacggccatggtgtatcccgaagag
gcggagcccaagcagggtcggatcgtggtctttcagtattccgacggaaaactacagact
gtggctgagaaggaagtgaaaggggccgtgtactccatggtggaattcaacgggaagctg
ttagccagcatcaatagcacggtgcggctttatgagtggacaacagagaaggagcttcgc
accgagtgcaatcactacaacaacatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctcagtgctgctgcttgcctacaagcccatggagggg
aactttgaagagattgctcgagacttcaatcctaactggatgagtgctgtcgaaatcttg
gatgacgacaatttcctgggggctgaaaatgcttttaacttgtttgtgtgtcagaaggat
agcgctgccactaccgacgaggagcgccagcacctccaggaggtcggtctctttcacctg
ggcgagttcgtcaacgtcttctgccacggctctctggtcatgcagaacctgggcgagact
tccacgcccacacagggctcggtgctcttcggcacagtcaacggcatgattgggctggtg
acctcgctgtccgagagctggtacaacctgctgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagatcgagcactctttctggagatcctttcatactgagcga
aagacagaaccggccacaggcttcattgatggagacttgattgagagtttcctagacatc
agccggcccaagatgcaggaggtcgtggcaaacctacagtacgatgatggcagcggaatg
aagcgagaggccaccgccgacgacctgatcaaggttgtggaggagctgacgcggatccat
tag

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