Felis catus (domestic cat): 101081156
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Entry
101081156 CDS
T02385
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04151
PI3K-Akt signaling pathway
fca04510
Focal adhesion
fca04512
ECM-receptor interaction
fca04820
Cytoskeleton in muscle cells
fca04974
Protein digestion and absorption
fca05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101081156 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101081156 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101081156 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101081156 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101081156 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101081156 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fca04147
]
101081156 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101081156 (COL6A1)
Exosome [BR:
fca04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101081156 (COL6A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101081156 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
101081156 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
101081156
NCBI-ProteinID:
XP_011284013
UniProt:
M3WLD9
LinkDB
All DBs
Position
C2:complement(791538..813379)
Genome browser
AA seq
1027 aa
AA seq
DB search
MKLAHALVPLLLQACWVAAQDVPGNDRAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKTFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIRSLTRMPSGRDVLKASVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTIIDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGSKGYKGEKGKRGIDGVDGMKGEMGYPGLPGCKGSPGFDGAQGPPGP
KGDAGAFGLKGEKGAPGADGEPGRPGSTGPPGDEGEPGLPGPPGEKGEAGDEGNPGPDGA
PGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPIGPKGYRGD
EGPPGPEGSRGAPGPTGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPPGVKGAKGYRGPEGPQGPPGHTGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSRDELVKFEPRQSHA
GVVQYSHNQMQEHVDMRTPNIRNAQELKEAIKKLQWMAGGTFTGEALQYTRDRLLPPSDN
NQIVLVITDGRSDTQRDPTPLSVLCGPDVQVVSVGIKDMFGFVAGSDQLNVISCQGLGPQ
GRPGISLVKENYAELLEDAFLKNITTQICIDKKCPDYTCPITFTSPADITILLDGSASVG
SHNFDTTRRFAKRLAERFLTAGKTNPSHDVRVSVVQYSGPGQQQPERASLQFLQNYTVLA
GTVDSMTFFNDATDVNDALGYVTRFYREASSVPAKKRLLLFSDGNSQGATAAAIEKAVQE
AQRADIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAYGERHLFRVPSYQALMRGVFYQTV
SRKVALS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcccatgctctggtgcctctgctgctgcaggcctgctgggtggccgctcag
gacgtcccgggcaatgacagggcggtcgccttccaggactgccctgtggacctcttcttt
gtgctggacacctctgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaggtcaagacctttaccaagcgcttcatcgacaacctgagagacaggtactatcggtgt
gaccgtaacctggtgtggaacgcgggcgcgctgcactacagcgacgaggtggagatcatc
cgctcactcacacgcatgcccagcggtcgcgatgtactcaaggccagtgtggatgcggtc
aagtactttggcaagggcacatacacggactgcgccatcaagaaggggctggaggagctg
ctcgtggggggctcccacctgaaggagaacaagtacctgattgtagtgactgatgggcac
cccctggagggctacaaggagccgtgtgggggcctggaggacgccgtgaacgaggccaag
cacctgggcatcaaagtcttctcagtggccatcacgcccgaccacctggagccacgtcta
agcatcatcgccacagaccacacgtaccggcgcaacttcacggcggctgactgggggcag
agccgggacgcggaggaagtcatcagccagaccattgacaccatcattgacatgattaaa
aacaatgtggagcaagtgtgctgttccttcgagtgtcagcccgccagaggacctcccgga
ccacggggtgaccccgggtacgagggagaacgtgggaagccaggtctcccaggagagaaa
ggagaagccggagaccctggaaggcctggggacctcggaccggtcggctaccaggggatg
aagggagaaaaagggagccgaggggagaagggctccaggggatccaagggctacaaggga
gagaagggcaagcgtggcatcgatggcgtggacggcatgaagggggagatggggtacccc
ggcctgccagggtgcaagggctcacccggattcgacggcgctcaaggacccccagggccc
aagggcgacgcgggtgccttcggactgaaaggagaaaagggtgcgcctggagctgatggg
gagcctgggaggccggggagcacagggccccctggggatgagggcgagccggggctgcct
ggtcccccgggagagaagggagaggccggcgacgagggaaacccgggaccggacggtgcc
cctggagaaagaggcggccctggggaaagaggaccgcgggggaccccaggcgtgcgcggc
cccaggggagacccgggcgaagctggaccccagggtgaccagggacgagaaggccccgtc
ggcatccccggagacccgggtgaggctggccccattggacctaaagggtaccgaggcgac
gaggggcccccggggcctgagggttccagaggggccccagggcccacgggaccccccgga
gaccccgggctgatgggcgaaaggggggaagacggcccacccggaaacggcactgagggc
ttccctggcttccctggctatccaggcagcaggggcccccccgggataaacggcactaaa
ggctacccgggcctcaagggggacgaaggagaagccggagaccctggagaggacaacaac
gacatcgcacccccaggtgtcaaaggagccaagggataccggggccccgaaggcccccag
ggacccccaggacacacgggaccaccagggccggatgaatgtgagatcttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgtggccccatcgacatcctcttcgtgctg
gacagctcggagagcataggccttcagaactttgagatcgccaaggacttcatcatcaag
gtcatcgacaggctgagcagagacgagctggtcaagtttgagccccggcagtcgcacgca
ggggtggtgcagtacagccacaaccagatgcaggagcacgtggacatgaggacccccaac
atcaggaacgctcaggagctcaaggaagccatcaagaagctgcagtggatggcggggggc
acgttcaccggcgaggccctgcagtacacgcgggaccggctgctgccaccctccgacaac
aaccagatagtgctagtcatcacggacggccgctcagacacccagagggaccccaccccg
ctcagcgtgctctgcggcccggacgtccaggtggtctccgtgggcatcaaggacatgttt
ggcttcgtcgcgggctccgaccagctcaacgtcatctcctgccaaggcctggggccccag
ggccggccaggcatctcgctggtgaaggagaactatgccgagctgctcgaggacgccttc
ctaaagaacatcaccacccagatctgcatagacaagaagtgcccagattacacgtgccca
atcaccttcacctccccggccgacatcaccatcctgctggacggctcggccagcgtgggc
agccacaacttcgacaccaccaggcgcttcgccaagcggctggccgagcgcttcctgacg
gcgggcaagacgaacccctcccacgacgtgcgggtgtcggtggtgcagtacagcggcccc
gggcagcagcagccggagcgcgcgtcgctgcagtttctgcagaactacaccgtgctggcc
ggcaccgtggacagcatgaccttcttcaacgacgccactgacgtcaacgacgccctcggc
tacgtgacgcgcttctaccgcgaggcctcgtccgtcccagccaagaagaggctgctgctc
ttctctgacggcaactcacagggggccacggcggcggccatcgagaaggcggtgcaggag
gcccagcgggcagacatcgagatcttcgtggtggtggtgggccgccaggtgaacgagccg
cacatccgcgtcctggtcacgggcaagacggccgagtacgacgtggcctatggcgagcgc
cacctgttccgcgtgcccagctaccaggccctaatgcgtggcgtcttctaccagacggtg
tccaggaaggtggcgctgagctag
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