Felis catus (domestic cat): 101081657
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Entry
101081657 CDS
T02385
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X6
KO
K12821
pre-mRNA-processing factor 40
Organism
fca
Felis catus (domestic cat)
Pathway
fca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101081657 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fca03041
]
101081657 (PRPF40A)
Spliceosome [BR:
fca03041
]
Complex A
U1 snRNP components
U1 related factors
101081657 (PRPF40A)
Complex B
101081657 (PRPF40A)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
101081657
NCBI-ProteinID:
XP_011283562
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All DBs
Position
C1:complement(143092723..143146872)
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AA seq
994 aa
AA seq
DB search
MQATPSEAEAGGESPKSCVSTAHSDWTAGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHG
MMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAK
SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ
TKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEETSKQEECTTTSTAPVPTTE
IPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASNTVGGTVPVVPEPEVTSIVA
TVVDNENTVTISTEEQAQLSSTPAVQDQSMEVSSNTGEETAKQEAVADFTPKKEEEESQP
AKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNA
YKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERD
RLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTF
AEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHE
HGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDIL
KDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKM
KRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHE
CQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESE
RSYKKSKKHKKKSKKRRHKSDSPESDAERDKDKKEKDRESEKDRTRQRSESKHKSPKKKT
GKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccaagtgaggcagaggctgggggcgaatcgccgaagagctgcgtgtcg
acagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagctgagcgtggaggcctcatgatggggcaccctggcatgcattat
gccccaatgggaatgcaccctatgggtcagagagccaatatgcctcctgtacctcatgga
atgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcctggaatg
atgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaagcttccatgcagcct
gccttaccgccaggagtaaataatatggatgtagcagctggtacagcgtctggtgcaaaa
tcaatgtggaccgaacataaatcacctgatggaaggacttactactacaatactgaaaca
aaacagtctacttgggagaaaccggatgatctgaaaacacctgctgagcaacttttatct
aaatgtccctggaaggaatacaaatctgactctggaaagccttactattataattctcaa
acaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggataccagaat
accattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaa
gaaaccagtaagcaagaagagtgcaccacaacatcaacagccccagttcctacaaccgaa
attccgaccacaatgagcaccatggctgctgcagaagctgcagccgctgttgttgcagcc
gcagcggcagctgctgccgctgctgctgcagccaatgccagtgcttccacctctgcttct
aatactgtgggtggaactgttccagttgttcctgagcctgaggttacttcgattgttgct
actgttgtagataacgaaaatacagtaacaatttcaactgaagaacaagcacaacttagt
agtactcctgctgttcaggatcagagtatggaagtatccagtaatactggagaagaaaca
gctaagcaggaagcagtagctgattttactcccaaaaaagaagaggaggaaagccaacca
gcaaaaaagacctatacttggaatacaaaggaggaggcaaagcaagcatttaaagaatta
ttaaaagaaaagcgagtaccatctaatgcttcatgggaacaagctatgaaaatgatcatt
aatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgct
tacaaagtccagacagagaaagaagaaaaagaagaagcaagatcgaaatacaaagaagct
aaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaaccagatac
aaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgtgat
cgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagca
aagcagttacgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaat
gtaacatactctactacgtggtctgaagcacagcagtatctgatggataatccaaccttt
gcagaagatgaggaattgcagaacatggataaagaagatgcattaatttgctttgaagaa
cacatccgagctttagaaaaggaagaagaagaagaaaaacaaaagagtttgctaagggaa
aggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaactgcacgaa
catggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttccgac
atcagattcactaatatgcttggtcagccgggatcaactgcacttgaccttttcaagttt
tatgttgaggatcttaaagcacgttatcatgatgagaagaagatcataaaagacatctta
aaggataaaggatttgtagttgaagtgaatactacttttgaagacttcgtggccataatc
agttcaactaaaagatcaaccacattagatgccggaaatattaagttggctttcaatagt
ttactagaaaaagcagaagcccgtgaacgtgaacgagaaaaagaggaggctcggaagatg
aaacgaaaagaatctgcgtttaagagtatgttgaaacaagctactcctccaatagaattg
gatgctgtctgggaagatatccgggagagatttgtaaaagagccagcatttgaggatata
actctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaa
tgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaacatcacagg
aaacgttcccgctctagatcggggtcagattcagatgatgatgacagccactcaaagaaa
aaaagacagcgatcagagtctcggtctgcttcagaacattcttctagtgctgaatctgag
agaagttataagaagtcaaaaaaacataagaagaaaagcaagaagaggagacataaatct
gactctccagagtctgatgctgagcgagacaaggataaaaaagaaaaagaccgagaaagt
gaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaagact
ggaaaggattctgggaattgggatacttctggcagtgagctgagtgaaggggaattggaa
aagcgcagaaggacccttctggagcaactggatgatgatcaataa
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