Felis catus (domestic cat): 101082193
Help
Entry
101082193 CDS
T02385
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04820
Cytoskeleton in muscle cells
fca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101082193 (COL5A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101082193 (COL5A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101082193 (COL5A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101082193 (COL5A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101082193
NCBI-ProteinID:
XP_023098718
LinkDB
All DBs
Position
D4:complement(93587273..93735906)
Genome browser
AA seq
1838 aa
AA seq
DB search
MDVHTRWKARSPPRPGAPLLSPPLLLLLLLLLWAPPLSRAAQPADLLKVLDFHNLPDGIT
KTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASSFPEDFSILTTVKAKKGSQAFL
VSIYNEQGIQQIGLEMGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSIHKKN
VTLILDCKKKTTKPLDRSDHPVIDVNGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDH
CEHYSPDCDTAVPDTPQSQDPNPDEYYPEGEGEGDAYYYEYPYYEDTEDPGKEPAPTNKP
VEAARETTEIAEEQTTAPTAAPSVPDTSEGAGKEDDPGLGVYDYMPSEDYYTPAPYEDLN
YEGFENPDLPPDHGAGAEVPTSTTSTANASNPAPPPEDDLEGEFTEETIRNLDETYYDPY
YDPTVSPSEIGPGMPANQDTIYEGIEGPRGEKGQKGEPAIIEPGMLMEGPPGPEGPAGLP
GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
AQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPP
GPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDD
GDRGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP
GQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP
GPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGED
GPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR
GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP
GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP
GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPP
GPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPV
GLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEP
GPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS
GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAA
GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEAGQTGSPGPT
GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR
GIPGPVGEQGLPGAPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK
GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP
GPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGAGESYVDYADGMEEIFGSLNSLKL
EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGATC
VFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASANQ
NITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVL
EIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFLG
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacacccgctggaaagcgcgcagcccgccgcgcccgggcgccccgctgctg
tccccaccgctgctgctgctgctgctgctgctgctgtgggcgccgcctctgagccgcgca
gctcagccagcagatctcctgaaggttctagattttcacaacttgcctgacggaataaca
aagacaacaggtttttgtgcaacgcggagatcttccaaaggcccagatgtcgcttacaga
gtcacgaaagatgctcagctcagcgcacctaccaagcagctgtatcctgcgtcttcattt
cccgaggacttctccattctaaccactgtgaaagccaagaaaggcagccaggccttcctg
gtctccatctacaatgagcagggcatccagcagatcggcctggaaatgggtcgctctccg
gttttcctctatgaggaccacacagggaaaccagggccagaggactatcccctcttcagg
ggcatcaacctgtcggatggcaagtggcacaggatcgctctcagcatccacaagaagaac
gtcaccttgatcctggattgtaaaaagaagaccaccaagcccctcgaccgcagcgaccac
cccgtaatcgacgtcaacggcatcatcgtgttcggaacccggatcctggatgaggaagtg
tttgagggtgacatccagcagctgctctttgtctcggaccatcgggcggcttacgatcac
tgtgagcactacagcccagactgtgacaccgcggtccccgacaccccccagtcacaggat
cccaacccggatgaatattacccagaaggagaaggggaaggtgacgcgtactactacgag
tacccctactacgaggacacagaggacccgggcaaggagcccgcccccaccaacaagccc
gtggaagctgctagagagaccacagagattgccgaggagcagaccacagcccccacggca
gccccctcagtgcccgacaccagcgagggggccgggaaggaggacgaccccggcctcggg
gtctacgactacatgcccagcgaggactactacacgcccgccccgtatgaggacctgaac
tacgagggcttcgagaatcccgacctgccccccgatcacggcgcaggggccgaggttccc
accagcacgaccagcacggccaacgcctccaatcctgctccgcctccggaagatgacttg
gaaggcgagtttacggaagaaaccatcaggaacctggacgagacctactacgacccctac
tacgaccccacggtgtccccgtcggagatagggccgggcatgcccgccaaccaggacacc
atctacgaagggatcgaaggaccccgaggagagaagggccagaagggagagcctgccatc
atcgaaccaggcatgcttatggaggggccgccgggccccgaaggccccgcaggtctccca
ggacctccgggaacgatgggacccactggccaagtgggtgaccctggagaaaggggtccc
cctggacgcccaggccttccaggggccgatgggctgcccggccctcctggaaccatgctc
atgttgcccttccgctttggagggggcggtgacgctggctccaagggtcccatggtgtcg
gctcaggagtcccaggctcaggccatcctgcagcaggcccggctggcgttgagggggcca
gctggcccgatgggtctgacggggaggcccggccccatgggccctccggggagcggaggt
ctgaagggcgagccgggagacatggggcctcagggtccccgaggagtgcagggcccgcct
ggcccggccggaaaacctggaagaaggggccgagctgggagtgacggagcaagagggatg
ccggggcaaacgggcccgaagggcgaccgcggcttcgacggcctggctggactgccgggg
gagaagggccaccggggtgaccctggtccttctggcccgccaggacctccgggagatgat
ggagatcggggtgatgatggagaagtcgggcccagagggctgcccggggaacccgggccg
cgtggtctgttggggccaaaggggcccccgggccctcctggacctccgggtgtgacgggt
atggatggccaaccaggtccgaaaggaaatgtgggcccccagggagagcctggccccccg
ggacagcagggcaatccaggtgcccagggtctcccaggcccccagggtgcaattggtcct
ccaggggaaaagggtcccctggggaaaccaggcctgccaggaatgcccggtgctgacgga
cccccggggcaccctggcaaggaaggccctccaggagagaaaggaggccagggtccaccc
ggcccccagggccccatcggctatccgggtccccgaggagtcaagggagctgatggcatc
cgcggtctgaaaggcaccaagggcgagaagggtgaagacggctttcctgggtttaaaggc
gacatgggaatcaagggcgatcggggggagatcggaccccctggtcccagaggagaagat
ggccccgaaggcccgaagggtcgtggaggtccaaacggcgacccgggtcctctgggaccc
cctggggagaagggaaaactcggagtgccgggattaccaggttacccgggaagacaaggg
cccaagggttctatcggatttcctggctttcctggtgccaatggagagaagggcggcagg
ggcacacctgggaagccaggaccacgggggcagcgaggcccgacgggtccgaggggcgaa
cggggcccccggggcatcactgggaagcccggccccaagggcaactctggaggcgatggc
cccgctggccctccgggtgaaaggggacccaacggaccccaaggacccaccggtttccct
ggacccaagggccctcctggccctccgggcaaggacgggctcccgggacaccctggacag
agaggagagaccggtttccaaggcaagaccggccccccagggcccccgggagtcgtgggc
cctcagggtcccacgggagaaacgggcccaatgggcgagcgtggccaccccgggccccca
ggcccccccggtgagcaggggctccctggccttgccgggaaagaagggacgaagggtgac
ccaggtcccgccggcctccctgggaaagacggccctcctggactgcgtggtttccctggg
gatcgggggcttcccggtccagtgggcgcactcggactgaaaggcagcgaaggcccccct
ggcccgccaggccccgcgggatcccccggagagagaggcccggccggtgctgctgggccc
atcggaatcccagggagacccgggccccaaggacctccagggccggctggggagaaagga
gctcctggtgagaagggtccccaaggcccagctggccgagatggcctccagggtcccgtg
gggctccctggtccagctggccccgtgggcccccctggagaagacggagacaagggagag
atcggggagcctggacagaaggggagcaagggggacaagggcgagcagggtccacctggg
cccaccggtcctcagggccccatcggacagccaggcccctccggagccgacggcgagcca
ggccctcgcggccagcagggcctttttgggcagaaaggtgacgaaggtccaagaggattt
cctgggccccccgggccagtggggctgcagggtctgccgggacctcccggagagaagggc
gagactggggacgtgggtcagatgggacccccgggcccccccggcccccgaggaccctct
ggagctccaggcgccgacgggccacaagggcctccgggtggcataggcaatcccggtgcg
gtgggagagaagggtgagcctggtgaagccggagagcctggcctgcctggagaggggggc
cctccgggacccaaaggagagcggggcgagaagggcgagtcgggcccttctggtgcagct
ggaccccctggacccaaaggccctcctggggacgacggtcccaaaggcagccccggccct
gtcggctttcctggagatcctggtccccccggagagcctggccccgcgggtcaagatggc
ccccctggtgacaaaggggacgacggtgaggctgggcaaacgggatccccgggccctacc
ggtgaaccgggaccgtctgggcctccaggaaaaaggggcccccccggccccgcaggcccc
gaaggcagacagggagagaagggagccaagggggaagccggcttagaaggccctcctggg
aagactggccccatcggcccccagggggcccctgggaagcccggccccgatggcctgcga
gggatccctggccctgtgggtgagcaaggtctcccaggcgccccaggccccgacggcccc
cccggccccatgggtcccccaggactccccggcctcaaaggagattctggccctaagggg
gaaaagggtcatccaggcttgatcggactcatcggacctccgggcgaacagggtgaaaag
ggcgaccgcggtctccccggcccccagggctcctccggccctaagggcgaacagggcatc
actggtccttccggcccgatcggccctccgggccctcccggcttgccgggtcctcctggg
ccaaaaggtgctaagggctcctcgggtcccactggcccgaagggtgaggcaggccaccca
ggaccccccggcccgccgggtcctcccggcgaggtcatccagcccctgccgatccaggca
tccaggacccggcggaacatcgacgccagccagctgctggacgacggggccggcgagagc
tacgtggactacgcggacggcatggaggagatcttcggctccctcaactccttgaagtta
gagatcgagcagatgaagcggcccctgggcacgcagcagaaccccgcacgcacctgcaaa
gacctgcagctctgccatcccgacttcccggacggtgaatactgggtagatcctaaccaa
ggctgctccagagactccttcaaagtttactgcaatttcacggccggaggggcgacgtgc
gtcttccccgacaagaagtccgagggggccaggatcacttcttggcccaaagaaaacccg
ggttcctggttcagtgaattcaagcgcggtaaactgctctcctacgtggacgccgagggc
aaccccgtgggtgtggtccagatgaccttcctgcgcctcctgagtgcctccgccaaccag
aacatcacctacaactgctaccagtcggtcgcctggcaggacgcggccacgggcagctac
gacaaggccatgcgcttcctgggctccaacgacgaggagatgtcctacgacaacagcccc
tacatccgcgccctggtggatggctgtgctacgaagaaagggtatcagaagaccgtgctg
gagatcgacacccccaaggtggagcaggtgcccatcgtggacatcatgttcaatgacttc
ggtgaagcgtcacagaaattcggatttgaagtggggccagcttgcttcctgggctag
DBGET
integrated database retrieval system
