KEGG   Felis catus (domestic cat): 101083847
Entry
101083847         CDS       T02385                                 
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
fca  Felis catus (domestic cat)
Pathway
fca03013  Nucleocytoplasmic transport
fca03015  mRNA surveillance pathway
fca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101083847 (DDX39B)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101083847 (DDX39B)
   03015 mRNA surveillance pathway
    101083847 (DDX39B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fca03019]
    101083847 (DDX39B)
   03041 Spliceosome [BR:fca03041]
    101083847 (DDX39B)
Enzymes [BR:fca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101083847 (DDX39B)
Messenger RNA biogenesis [BR:fca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101083847 (DDX39B)
Spliceosome [BR:fca03041]
 Complex C
  Other components
   EJC/TREX
    101083847 (DDX39B)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101083847 (DDX39B)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 101083847
NCBI-ProteinID: XP_003985959
UniProt: A0A2I2U6G2
LinkDB
Position
B2:complement(30377837..30389197)
AA seq 428 aa
MAENDVDNELLDYEEDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
SSYIEQTR
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcagagaacgatgtggacaatgagctcttggactatgaagaagatgaggtggagaca
gcagcagggggagacggggctgaggcccctgccaagaaggatgtcaagggctcctatgtc
tccattcacagctctggctttcgtgacttcctactgaagccagagttgctccgggccatt
gttgactgtggctttgagcatccgtcagaagtccagcatgagtgcatccctcaggccatt
ttgggaatggatgttctatgccaggccaagtcaggcatgggaaagacagcagtgtttgtg
ctggccacactgcaacagctggagccggttactggacaggtgtctgtgctggtgatgtgt
catactcgggagttggcttttcagatcagcaaggagtatgagcgcttttctaaatacatg
cccaatgtcaaggtcgcggtgttttttggtggtctgtctatcaagaaggatgaagaggtg
ctgaagaagaactgcccgcatatcgtcgtggggacccctggccgcatcctagccctggct
cgaaataagagcctcaatctcaaacacattaaacactttatcttggatgagtgtgataag
atgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccat
gagaagcaggtcatgatgttcagtgctaccttgagcaaagagatccgtccagtctgccgc
aagttcatgcaagacccaatggagatcttcgtggatgatgagacgaagctgacgctgcat
gggttgcagcagtactacgtgaaactgaaggacaacgagaagaaccggaagctctttgac
cttctcgatgtccttgagttcaatcaggtggtgatctttgtgaagtctgtgcagcgttgc
attgccctggcccagcttctagtggagcagaacttcccagccattgccatccaccgaggg
atgccccaggaggagaggctttctcggtatcagcagtttaaagattttcaacgacgaatt
cttgtggccaccaacctatttggccgaggcatggacattgaacgggtgaacattgctttc
aactatgacatgcctgaggattctgacacctacctgcatcgggtggcccgagcaggccgg
tttggcaccaagggcttggccatcacgtttgtgtcagatgaaaacgatgccaagatcctc
aatgatgtgcaggatcgctttgaagtcaatattagtgagctgcctgatgagatagacatt
tcctcctacattgaacagacgcggtag

DBGET integrated database retrieval system