Felis catus (domestic cat): 101083989
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Entry
101083989 CDS
T02385
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
fca
Felis catus (domestic cat)
Pathway
fca04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101083989 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fca04131
]
101083989 (RABGEF1)
Membrane trafficking [BR:
fca04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101083989 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
101083989 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Bac_RepA_C
Motif
Other DBs
NCBI-GeneID:
101083989
NCBI-ProteinID:
XP_011288633
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All DBs
Position
E3:complement(15565318..15628479)
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AA seq
492 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQS
EFTQDFYQNVTERMQTRGKVPPEKVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQ
LNERQERIMSEAKKLEKDLIEWTDGIAKEVQDIVEKYPLEIKPPNQSLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtctgaacgccgtggaattcacgtggatcagtcggagctcctatgcaag
aaaggatgtggttactatggcaaccctgcttggcagggtttctgctccaagtgctggagg
gaagagtaccacaaagccaggcagaagcagattcaggaggattgggaactggcagagcga
cttcagcgggaggaggaagaggcctttgccagcagtcagagcagccagggggcccaatcc
ctcacattttccaagtttgaagaaaaaaaaaccaatgagaagacccgcaaggttaccaca
gtgaagaaattcttcagtgcttcatccagggttggatcaaagaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagctgtttttggaagcaatgcattacaaaagggatttaagcattgaggaacagtca
gagtttactcaggatttttaccagaatgtgactgaaagaatgcagactcgtggaaaagtg
cctccggaaaaagttgagaagataatggatcagatcgaaaagtacatcatgactcgtctc
tataagtatgtgttctgtccagaaactaccgatgatgagaagaaagatctcgctattcaa
aagaggatccgagccctgcactgggttacacctcagatgctttgcgtccctgttaatgaa
gaaatttccgaagtatctgatatggtggtgaaagcaatcacagatatcattgaaatggat
tctaagcgtgtacctcgagataagttggcctgcatcaccaagtgtagcaagcacatcttc
aatgccattaagatcaccaagaacgagccagcgtcagccgatgactttttacccactctc
atctacattgttttgaagggcaaccccccacgccttcagtccaatatccagtatatcacc
cgcttctgcaacccaagccgattgatgactggagaggatggctactatttcaccaatctg
tgctgtgctgtggctttcattgagaagttagatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtccggccagacttctcccaggaagcaagaatctgagaattgg
tctcctgatgcttgcttaggggttaagcaaatgtataagaacttggatcttctgtctcag
ttgaatgaacgacaagaaaggatcatgagtgaagccaagaaacttgaaaaagacctcata
gagtggacagatggaattgcaaaagaggttcaagacattgttgagaaatatccactcgaa
attaagcccccgaatcaatctttagcagctattgactctgaaaatgttgaaaatgataaa
cttcctccaccattgcaacctcaagtttatgcaggatga
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