Felis catus (domestic cat): 101085899
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Entry
101085899 CDS
T02385
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
fca
Felis catus (domestic cat)
Pathway
fca03013
Nucleocytoplasmic transport
fca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101085899 (UPF2)
03015 mRNA surveillance pathway
101085899 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fca03019
]
101085899 (UPF2)
Messenger RNA biogenesis [BR:
fca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101085899 (UPF2)
mRNA cycle factors
P-body specific factors
101085899 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
101085899
NCBI-ProteinID:
XP_011281863
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All DBs
Position
B4:complement(11419868..11532128)
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AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKETLLNNKEKDCSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEEKKKQEEQVKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEAKEPKDNKEVSNPEDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKE
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNDPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaaactttactaaacaac
aaggaaaaggactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggag
atcaaacttactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagaaaaagaagcaagaagagcaggtaaaacgtcagcaagaagaagaagctgcccagttg
aaagagaaagaagaatcccttcagcttcatcaagaagcttgggaacgacatcagttaagg
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagcttgaagaaaaatactgcttttgtcaagaaattaaaaactatt
acggaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctgaaaatatctgatgtgaactgt
gctgtgcacttgtgttctctctttcaccagcgttatgccgactttgctccgtcacttctt
caggtttggaaaaaacattttgaagcgaggaaagaagagaaaacccctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctatccttaatctatgaacagctaaaaaatattattaatgctgatcgggaatcc
catactcacgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccacggaaagtgaagagtgctgcggagaagtttaatttgagtttccctcctagt
gagataattagtccagagaaacagcaacctttccagaatcttttaaaagagtactttaca
tctttgaccaaacacctgaaaagggaccacagggagcttcagaatacagagagacaaaac
aggcgtattctccattctaaaggagagctaagtgaagatagacataaacagtatgaggag
tttgctatgtcgtatcagaagttgctagcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatctttacacctggtaagcctggagaatatgatttggaaggtggtatttgggaagat
gaagacgctcggaatttttatgagaacctcatcgatttgaaagcttttgttcctgccatc
ttgtttaaagataatgagaaaagttgtcagaataaagattccaacaaagatgattccaaa
gaggcaaaagaacctaaagataataaggaggtatcgaatcctgaagatttggaacttgag
ttggagaacctagaaattaatgatgataccttggaattagaaggtggagatgaagctgag
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctacagcagttgcccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaatacaaaagcaaatagg
aagaagttggtacgggcgctcttcatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acgaagaacaaaactgttcgttttattggagaattaactaaatttaagatgttcacaaaa
aatgatacactacattgtttaaagatgcttctatcagacttttcccatcaccatattgaa
atggcatgtactctactggaaacatgtggaagatttcttttcagatctccagaatcacac
ctgaggaccagtgtacttttggaacaaatgatgagaaagaagcaagcaatgcaccttgat
gcaagatacgttacaatggtggagaacgcatattactactgcaacccacctccagctgaa
aaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtacaag
gatctctcaaaggttaccactgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaacgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactggtactctaccaagaagatgtt
ggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaaccagagacgtatcagcagtgccaagttcttaggggaactttataattat
cgaatggtggaatcagctgttatttttagaactctttattcttttacttcatttggtgtt
aacccggatggctctccaagttcactagacccccctgagcaccttttcagaattaggcta
gtgtgcactattttggatacctgtggccagtactttgacagaggttctagtaaacgaaaa
cttgattgcttccttgtatactttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacgaaagaccatccatttcctattgacatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctagtaaatgataaagattcaaaagag
tctatgacggaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaa
acggaagaacaatctggaaatgaaagtgaagtaaatgacccagaagaagaggagggttct
gataatgatgatgatgagggcgaggaagaagaggaagagaataccgattaccttacagat
tcaaataaagagaatgaaacagatgaagaaaatactgaggtaatgattaagggaggtgga
cttaagcatgtaccttgtgtggaagatgaggacttcattcaagctctggataaaatgatg
ctggaaaaccttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgct
attcctttgcatctcaaaagccagctgaggaaagggccaccactcggtggtggggaggga
gaggcagagtctgcagacactatgccctttgtcatgttaacaagaaaaggcaataaacaa
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccag
caacaggcagaacaagaagagaggatgagaatgaaaaagctcactctagatatcaatgaa
cggcaagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagcccca
gcaaacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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