Felis catus (domestic cat): 101086476
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Entry
101086476 CDS
T02385
Symbol
HTT
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
fca
Felis catus (domestic cat)
Pathway
fca05016
Huntington disease
fca05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101086476 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
101086476 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fca03019
]
101086476 (HTT)
04131 Membrane trafficking [BR:
fca04131
]
101086476 (HTT)
03029 Mitochondrial biogenesis [BR:
fca03029
]
101086476 (HTT)
Messenger RNA biogenesis [BR:
fca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101086476 (HTT)
Membrane trafficking [BR:
fca04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101086476 (HTT)
Mitochondrial biogenesis [BR:
fca03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
101086476 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
101086476
NCBI-ProteinID:
XP_044912891
LinkDB
All DBs
Position
B1:complement(203026106..203172138)
Genome browser
AA seq
3138 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQQQQPQPPPPPPQPPQPLPQAQPPLPQPQPPPP
PPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAM
ELFLLCSDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWR
FAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEIK
VLLKAFIANLKSSSPTIRRTAAGSAVTICQHSRRTQYFYSWLLNVLLGLLVPVEDEHSTL
LILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVCPSTEQLIQVYELTLHYTQHQD
HNAVTGALELLQQLFRTPPPELLQALTAPGGGQRSGVQYGPGGRSRSGSIAELLAGGGSS
CSPVLSRKQKGKVLFGDAAALEDDSESRSEGSSPAFAASVKGEIGGELAASSGVSTPGSA
GSTADSVGHDIITEQPRSQHTLQPDSVDLTGCDLASAATDGDEEDILSHSSSQISAVPSD
PAMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGMQIGQPQDEDE
EAAGILPEEDVDAFRNSAAALQQAHLLKSMGHSRRPSDSSVDTFVSRDEAAEAGDQENKP
CRIKGDIGQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAV
ALHPESFFSKLYKVPLDSVEYPEEPYVSDILNYIDHGDPQVRGATAVLCGTLISSTLSRS
RFQVGDWMGTVRALTGNTFSLEDCIPLLRKTLKDESSVTCKLACTAVRHCVMSLCSSSSS
ELGLQLITDVLSLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLKL
QDRVLHDVVIYLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADPVVAVARDQSSVYLK
LLMHETQPPSHFSVSTITRIYRGYNLLPSMTDVTVENNLSRVIAAVSHELVTSTTRALTF
GCCEALCLLSTAFPVCVWSLGWHCGAPPLSVSGESRKSCTVGMATVILTLLSSAWFPLDL
AAHQDALVLAGNLLAASAPRSLRSSWTSEEEANPAAAKQEEVWPALGDRTLVPMVEQLFS
HLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASAPLSPKKG
SEASPASRQSDASGPVTANKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSAEKF
GGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTN
LASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQ
DHDASGWFDVLQKVSTQLKTNLTSTTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQ
LQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVL
LSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKE
LETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQIADVILPMLAKQQM
HIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMAPVSTVQLWISGILAILRVL
ISQSTEDIVLSRIQELSFSPYLISCPVINRLREGDSTSTPEEHGEGRQMKSLPEETFSRF
LLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLL
TVDSSDSSFYGLDRLNAQVRAMVPTHPALVLLWCQILLLVSHTDHRWWAEVQQTPRRRSL
SSTKSLSPQMSGEEGDSDAASKPGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNH
IQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTTLKKTLQCLEGIHLS
QSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSMAQLPVEELTRIQEYL
QSSGLAQRHQRLYSLLDRLRLATAPGSRGPSPPITSHPLDGDGPLALETVIPDKDWYLRL
VKSQCWTRSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCLGLGMREVSGGQRSP
LFEAARLATLDRVTGLVQQLPAAHHVFQPFLPTEPTAYWNKLNDLFGDAVLYRSLTTLAR
ALAQYLLVFSKLPGHLHLPPEKERDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCC
LALQLPSVWSALSSPEMVTHACSLIHCVRFILEAIVVQPGDQLLSPDRRMNTPKAAREDE
VDSNTQNPAYITAACGMVAEMVEALPSVLALGHKRNSSTPAFLTSVLRNIIISLARLPLV
NSYTRVPPWXVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQF
EETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAV
SCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENVATHHLYQAWDPVPSLS
PATTGALIGHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEA
DVPTSASPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSL
LVVSDLFTERTQFEMMYLTLTELRRAHPAEDEILIQYLVPATCKAAAVLGMDKAVAEPVS
RLLESTLRSSHLPSRVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKGAAHCVNVH
SQQHVLVMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCVLRGLER
LLLSEQLCRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPSPA
APDSESVIVAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSN
QQPYPQFMATVVYKVFQTLHSSGQSSMVRDWVMLSLSNFTQRSPVAMAVWSLSCFFVSAS
TSPWVSAVLPHVISRMGKLERVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGN
PYHRLLTCLRNVHKVASC
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggaaaagctgatgaaggccttcgaatcgctcaagtctttccagcagcag
cagcagcagcaacagcagcagcagcagcagcagccgcagccgccgccgccgccgcctcag
cctcctcagccgctgccgcaggcgcagccgccgctgcctcagcctcagccgccgcctccg
ccgccgcccccgccgccccccggcccggccgtggccgaggagccgcttcaccgaccaaag
aaagaactctcagccaccaagaaagaccgtgtgaatcactgtctgacgatatgtgagaac
atagtggcacagtcactcagaaattctccagaatttcagaaacttctgggcatcgctatg
gaactcttcctgctgtgcagtgatgatgcagagtcggatgtcaggatggtggctgacgag
tgcctcaacagagtcataaaagcgctgatggactcgaatcttccgcggttacagcttgaa
ctctataaggaaatcaaaaagaatggcgctccccggagcctgcgtgctgccctgtggagg
tttgcggagctggctcacctggttcggcctcagaaatgcaggccttacttggtaaacctt
ttgccctgcctgactcgaataagcaagagacccgaggaatctgttcaggagaccttggct
gcagctgtacctaaaattatggcttcttttggcaattttgcaaatgacaatgaaattaag
gttctattgaaggctttcatagcgaatctgaagtcaagctcgcctaccattcggcgtact
gcagctggctcagcagtgaccatctgccagcactccagaaggacgcagtacttctatagc
tggctactgaacgtgctcctgggcttgctggttcctgttgaggacgaacactctaccctc
ctgattctcggagtgctgctcacgttgaggtatttggtgcccttgctgcagcagcaggtc
aaggacacgagcctgaaaggcagctttggggtgacacggaaggaaatggaagtctgtccc
tcaactgagcagctcatccaggtttacgaactgaccctgcattacactcagcaccaagac
cacaacgccgtgactggggcgctggagctcctgcaacagctcttcaggacgcccccgccc
gagctcctgcaggccttgaccgcgccgggcggcgggcagcggagcggcgtgcagtatggg
cccggcggccggagccgcagcggcagcatcgcggagctcctagccggagggggttcttca
tgcagccctgtcctttcaagaaaacaaaaagggaaagtgctcttcggagacgcagcagcc
ttggaggatgactccgagtccaggtcggagggcagcagccccgccttcgcagcctcagtc
aagggtgagattggtggtgagctggcggcctcttctggagtctccactcctggctccgcc
ggttcaacagccgactccgtggggcacgacatcatcaccgagcagccccgctcacagcac
acgctgcagccggactcggtggatctgaccggctgtgacttggcgagtgctgccaccgac
ggggatgaggaggacatcctgagccacagctctagccagatcagtgccgtcccgtctgac
ccagccatggacctgaacgatggcacccaggcctcctccccagtcagtgacagttcccag
accaccaccgaagggcccgattcggctgtgaccccttcagacagttctgaaatcgtgtta
gatggggccgacagccagtattcggggatgcagatcggacagccacaggacgaggatgag
gaggccgcgggcattcttccggaggaagacgtagatgctttccgaaactccgcagctgcc
cttcagcaagcacatttattgaaaagcatgggccacagccggcggccctccgacagcagt
gtggatacgtttgtctcaagagacgaagctgccgaagcaggagatcaagaaaacaagcct
tgccggatcaaaggtgacataggacagtctaccgatgacgattctgttcctcttgtccat
tgtgtccgccttctgtcggcttcgtttttgctgacgggggagaagaatgtgttggttccg
gacagggacgtgagggtcagcgtgaaggcactggcactgagctgtgtgggagccgctgtg
gcccttcatcctgagtctttcttcagcaaactttacaaagtacctcttgactccgtggag
taccctgaggagccatatgtgtcagacatcctgaactacatcgatcatggagacccccag
gtcagaggagccacggccgttctctgtgggaccctcatctcctccaccctgagcaggtcc
cgcttccaagtgggagactggatgggcaccgttagagctctgacaggaaatacattttct
ctggaggactgcattcctttgctgcggaaaactttgaaggatgaatcttccgtcacttgc
aagttggcctgcacagctgtgaggcactgtgtcatgagtctgtgcagcagtagctccagt
gaactgggactgcagctgatcaccgatgtactgagcctgagggacagctcctactggctg
gtgaggacagagcttttggagacgctcgcagagattgactttaggttggtgagctttttg
gaggcaaaagcagaaaatctacacagaggggcccatcattacacagggcttttaaaactg
caggaccgagtgctccatgacgtcgtcatctacttgcttggggacgaagaccccagggtg
cgacacgttgccgcagctgcactgatgaggcttgtcccgaagctgttttataaatgtgac
caaggacaggccgacccagtggtggctgtggcgagagaccaaagcagcgtttacctgaaa
cttctcatgcacgagactcagcccccatctcacttctccgtcagcaccataaccagaata
tacagaggctataacctactgccgagcatgacagacgtcactgtggaaaataacctctcg
agagtcattgcggcagtttcccacgagctggtcacgtcgaccacgcgagcacttacgttt
ggatgctgcgaggctttgtgtcttctttccactgcctttccagtctgcgtttggagttta
ggctggcactgtggggcacccccgctgagcgtgtccggtgagtccaggaagagctgtact
gttggcatggccacggtcatcctcaccttgctctcgtcagcttggttcccgctggacctc
gcagcgcaccaggatgcactggtgctggccggaaacctgctcgcagccagtgcccccaga
tctctgagaagttcgtggacctctgaggaagaggccaacccagcagccgccaagcaggaa
gaggtctggccggctctgggtgaccggaccctggtgcccatggtggagcagctcttctcc
cacctgctgaaggtgattaatatctgcgcacacgtgctggacgatgtggctcctggaccg
gcaataaaggcagccttgccgtccctaacaaaccctccttctctaagtccgatccgccgg
aagggaaaggagaaagagccgggagagcaggcctctgcgcccttgagccccaagaaaggc
agcgaagccagtccagcctctcgacaatccgatgcctcagggcctgttacagcaaataag
tcctcatcactggggagtttctaccaccttccttcatacctcaaattgcacgatgtcctg
aaagctactcacgctaactataaggttaccttggaccttcagaacagtgctgaaaagttt
gggggctttctgcgttctgccttggatgtgctctctcagatcctagaattggcaacactg
caggacatcgggaagtgtgtcgaggagatcctaggctacctgaaatcctgtttcagtcga
gaaccgatgatggcaactgtttgtgttcagcagttgctgaagactctttttgggacaaac
ttggcctcccagtttgatggcttgtcttccaaccccagcaagtcccagggccgagcgcag
cgtctgggctcctccagtgtgaggccgggcttgtaccactactgcttcatggctccctac
acccacttcacccaggccttagccgacgccagcctgaggaacatggtgcaggcagagcag
gaccacgacgcctcagggtggtttgacgtgcttcagaaagtgtctacccagttgaagacg
aacctcaccagcaccactaagaaccgcgcagataagaacgctattcacaatcacattcgt
ttgttcgagcctctggttataaaagctttaaagcagtacacaaccacaacgtctgtgcag
ctacagaggcaggtcttagatttgctggcacagctggttcagttacgggtcaattactgt
cttctggattcagatcaggtgtttattggatttgtgctgaagcagttcgaatacattgaa
gtaggccagttcagggaatcagaggcaattattccaaacatctttttcttcctggtatta
ctgtcttatgagcgctatcattcaaaacagatcattggaatccctaaaatcattcagctc
tgtgacggcatcatggccagcgggaggaaggctgtgacacatgccataccggctctacag
ccgatagtccatgacctgttcgtactgagaggagccaataaagctgatgcaggaaaagag
ctcgaaacccagaaagaagtggtggtgtccatgctgctgagactcatccagtaccatcag
gtgctggagatgttcatcctggtcctgcagcaatgccacaaggagagcgaggacaagtgg
aagcggctgtcccggcagatcgccgacgtcatcctcccgatgttggctaagcagcagatg
cacattgattctcacgaagcccttggcgtgttaaatactttatttgagattctggcccct
tcctccctccgtcccgtggacatgcttttacggagtatgttcgtcactccagacacaatg
gcacctgtgagcactgttcagctgtggatatcaggaatcctagccattttgagggttctc
atttcccagtcaactgaagacattgttctttctcgtattcaggagctctctttctctccg
tatttaatctcctgtccagtaattaataggctaagagagggggacagtacttcgacacca
gaagaacacggtgaagggagacaaatgaagagcttgccggaagaaacattttcaagattt
ctactacaactagttggcattcttttggaggatattgttacaaagcagctcaaagtggaa
atgagtgaacagcaacatactttctactgccaagaactgggcactctgctgatgtgtctc
atccacatcttcaagtctggaatgttccgtaggatcacagcagccgcctccagactcctc
acggtggacagcagcgacagcagcttctacggcctggacaggctgaacgcgcaggtgcgc
gccatggtgcccacgcatccggcgctcgtgctgctctggtgccagatcctgctgctcgtc
agccacaccgaccaccgctggtgggcagaggtgcagcagacccccaggagacgtagtctg
tccagtacgaagtcactcagcccccagatgtccggagaggagggggactccgacgcggcc
agcaaacccggaatgtgcaacagagaaatagtgcggcggggagctctcattctcttctgc
gattatgtctgtcagaacctacacgattcagagcacttaacgtggctcatcgtgaatcat
attcaggacctgatcaatctgtcccatgagcctcccgtgcaggatttcattagtgctgtt
caccggaactccgctgccagcggcctcttcatccaggcaattcagtctcgttgtgagaac
ctttcagcccccaccaccctgaagaagacgcttcagtgcttggaagggatccacctcagc
cagtcgggcgccgtgttaacactgtatgtggacaagcttttgtgcaccccgttccgagtg
ctggctcgcatggtcgacacccttgcctgtcgccgcgtggaaatgcttttggccgcaaat
ttacagagcagcatggcccagttgccggtggaggaactaaccagaatccaggaatacctt
cagagcagcgggctggctcagagacaccagaggctgtactccctgctggacaggcttcgt
ctcgctaccgcaccgggctcccgtggcccttctcctccaatcacgtcccacccgctggac
ggggatgggcccctggcactggagacagtcattccagacaaagactggtacctacgtcta
gtcaaatcccagtgctggactaggtcagattctgcgctgctggaaggggcagaactggtg
aatcggattcctcccagtgacatgagcacgttcatgatgaactcggaattcaacttaagc
ctgttggcgccgtgcctgggccttggcatgcgcgaagtctccggaggccagaggagtcca
cttttcgaagcagctcgcctggcgactctggaccgtgtgaccggcctggtgcagcagctc
cctgccgcccaccacgttttccagccgttcctgcccacagagcccaccgcctactggaac
aagttgaatgatctatttggggatgctgtgttgtatcgctccttgaccactctggcccgg
gctctggcccagtacctgctggtattctccaaactgcccggccacttgcaccttcctcct
gagaaggagagggacacggtgaagtttgtggtcatgaccctcgaggccctgtcgtggcat
ttgatccatgagcagatcccgctgagtctggaccttcaggcgggcctggactgctgttgc
ctggccctgcagctgcccagcgtctggagcgcactctcctccccagagatggtgacccac
gcctgttctctcatccactgtgtccgcttcatcctggaagccattgtggtgcagcctggg
gaccagcttcttagtccagaccgaaggatgaacaccccaaaggctgccagagaggacgaa
gtcgattcaaacacacaaaacccggcctatattaccgcagcctgtgggatggtggcagaa
atggtggaggctttgccgtcggtgttggccttgggccataaaaggaatagcagcacccca
gcgtttctcacatcggtgctcaggaacatcatcatcagcctggctcgcttacccctcgtc
aacagctacacgcgcgtccccccctggtgagtttggaaacttggatggtcacccaaaccg
ggaggggattttggtacagcgtttcctgagatcccagtggagttcctccaggagaaggag
gtctttaaagagttcatctatcgcatcaacactctagggtggaccagccgcacccagttt
gaggaaacgtgggccaccctcctcggtgtcctggtgactcagcccctcgtgatggagcag
gaggagagcccgccggaagaagacacggagaggacccagatcaacgtcctggccgtgcag
gccatcacctcactggtgctgagtgcgatgactgtgcccgtggccggcaacccggccgtg
agctgcctggagcagcagccccggaacaagcccctgaaagctctcgacaccaggtttggg
aggaagctgagcattatcagaggaattgtggagcaagaaatccaagcaatggtttcgaag
agagagaatgtcgccacccatcacttgtaccaagcgtgggaccccgtcccttctctctct
ccagctactacaggtgccctcatcggccacgacaagcttctgctgcagatcaaccctgag
cgggagctggggaacatgagctacaagctcggccaggtgtccattcactccgtgtggctg
gggaacagcatcacgcccctgagagaggaagagtgggaggaggaggaggaggaggaggcc
gacgtccccacgtctgcgtcaccacccacatcgccggtcaactccaggaagcaccgggct
ggagtcgacatccattcctgttcccagtttttgcttgaattgtatagtcgctggatcctg
ccgtcagggtcagccagaaggacccccatcatcctgatcagcgaagtggtccgatctctc
ctagtggtctcagacttgttcactgagcgcacccagtttgagatgatgtatctgacgctg
accgagctgaggagggcgcaccctgccgaagacgagattctcattcagtacctggtgcct
gccacctgcaaggcggctgccgtcctcggaatggacaaggccgtggccgagcccgtcagc
cggctgctggagagcacactgaggagcagccacctgcccagcagggtcggggccctgcat
ggcgccctctacgtgctggagtgtgacctcctggatgagacagcgaaacagcttgtccct
gtcatcagcgactacctcctgtccaacctcaaaggggcagcccactgcgtgaatgttcat
agccaacagcacgtgctggtgatgtgtgccaccgccttctacctgattgagaactatccc
ctggacgtaggcccagaattctctgcgtcagtaattcagatgtgtggggtgatgctgtcc
gggagtgaggagtccactccgtccatcatttaccactgcgtcctgcggggcctggagcgt
cttctgctctccgaacagctgtgccggctggatgctgagtccctggtcaagctgagtgtg
gacagagtgaacgtgcacagcccgcaccgggccatggctgccctgggcctgatgctcacc
tgcatgtacacagggaaggagaaaatcagcccaggcagaacctcagaccccagccccgcc
gccccagacagcgagtccgtgatcgtggctatggagcgtgtgtccgttcttttcgacagg
gtcaggaaaggattcccctgtgaagccagagtggtggcacggatccttcctcagttttta
gatgacttcttcccaccccaggatgtcatgaacaaagtcattggggaatttctgtccaac
cagcagccatacccacagttcatggccaccgttgtgtacaaggttttccagaccctgcac
agcagtgggcagtcgtcgatggtccgggactgggtcatgctgtccctctccaatttcacc
cagaggagcccggtggccatggctgtgtggagcctctcctgcttcttcgtcagtgcttcc
actagcccctgggtctccgccgtccttccccacgtcatcagcaggatgggcaagctggag
cgagtggacgttaacctcttctgcctggtggccacagacttttacagacaccagatagag
gaggagctggaccgccgggccttccagtccgtgttcgaggtggtcgcggctccgggaaac
ccataccatcgactgttgacttgtttgcggaacgtccacaaagtcgcctcgtgctga
DBGET
integrated database retrieval system
