Felis catus (domestic cat): 101086496
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Entry
101086496 CDS
T02385
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101086496 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fca04147
]
101086496 (COL18A1)
00535 Proteoglycans [BR:
fca00535
]
101086496 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101086496 (COL18A1)
Exosome [BR:
fca04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101086496 (COL18A1)
Proteoglycans [BR:
fca00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101086496 (COL18A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101086496 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101086496
NCBI-ProteinID:
XP_023094382
LinkDB
All DBs
Position
C2:complement(1260036..1351432)
Genome browser
AA seq
1741 aa
AA seq
DB search
MARDPGGRLGLLLLLLLLTYGLAAAQVDLLNWLWAPRTAGPTVEPASAPPRSPHVQPTEE
TAAHVAPRDDPTEQGRAPDSPEPPPGRLETGRDQASAVPTASTAGPDTKEENIAGVGAKI
LNVAQGIRSFVQLWDGTTPSQSSTGAETPAPGTPTAPLTLPGPSGVPPEDGTTLWLSSRA
LTSPDTQRTEAGTLPVPTQLPPSPGRPRAPLREPSVPPSSPGRASLSSVPGGAPPRGTQP
SPRRPHDLDGGGPSPVAARARRQRRLADSRRPAPHLLPLVTGLPGAHAAPLALSSDLPAL
VSPIPLPAVTGDKGAWAPHVANSVGPGLANNSALPGADLPTPTRQPARPAGRCLPLPPSL
PVCGHLGIGRSWLPNHLRHASSEEVRAAARAWGPLLRTHCHRFLAWFFCLLLAPPCGAGP
LPAPPPCRQFCEALEDACWSHLDGGGLPVTCASLPAQEDGVCVFIGPGAESLGTEVGLLQ
LLGEPPPQQVAQVDDPDVGPAFVFGPDANSGQVARYHFPNPFFRDFSLLFHIRPATEGAG
VLFAITDAAQAVVSVGVKLSAVRDGQQHIQLLYTEPGATRTRTAASFRLPTFTGQWTRFA
LSVDGATVALFVDCELFQRVPLVRSPRALELEPGAGLFVAQAGGADPSKFQGRIAELRVR
GDPRVSPLHCLEEDDEDSGGVSGDFGSGLEENRELLREQSGLSPKPSLPEAPPVTSPPLA
GGRNVEDSRTEEIEEETTMSSLGAWTLPGSDTVTAWSVRSPGGGPEEGPAGSAVQSPDMQ
PVPGPQGPPGPPGPPGKDGAPGKDGEPGDPGEDGKPGDPGPQGFPGTPGDMGPKGEKGDP
GVGPRGPPGPQGPPGPPGPSFRHDRLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPG
LPGEPGRFGMNSSDVPGPAGLPGVPGRDGAPGLPGALGPPGPPGRDGGPGKTGQKGSPGE
AGAPGPKGSKGDPGPTGAPGETGLAGAPGPAGPPGPPGPPGPPGPGLAAGFEDMDGSGGP
FWATAHGASGPQGPPGLPGVKGDPGIAGPPGAKGEVGADGPPGFPGLPGREGTAGAQGPK
GEKGTQGEKGDPGRDGVGQPGLPGPPGPPGPVVYVSEQDRAVAGVPGPEGRPGYAGFPGP
AGPKGDLGSKGQRGPPGPKGEKGEPGPVFSPDGGTLGPAQKGAKGEPGFRGPPGPYGRPG
HKGEIGFPGRPGRPGMNGLKGEKGEPGHASVGFGVRGPPGPPGPPGPPGPPGTPVYDSNA
FMESGRPGPPGLPGYQGPPGPKGDKGEVGPPGPPGQFPLDLLQLEAEMKGEKGDRGDPGQ
KGERGEPGGGGFFGSSVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQGP
PGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLDK
VPEVPEGWLIFVAETEELYVRVRNGFRKVLLEARTPLPRGTDNEVAALQPPLVQLHEGHP
YPRRELTHSTARPWRADDILAGPPRLPAPRPYPGAPHHGPYLHVQPARPTGGPARTHAHQ
DFQPVLHLVALNSPQPGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRA
DRTGVPIVNLRDEVLFPSWEALFSGSSEGQLKPGARVFSFDGRDVLQHPAWPQKSVWHGS
DPSGRRLTDSYCETWRTEDAAAAGQASSLLAGRLLAQKAASCRNAFIVLCIENSFMTSSS
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgaccccggcggccgcctgggccttctgctgctgctgctgctgctcacctat
ggcctcgcggccgcccaggttgacctactgaactggctgtgggcccctaggaccgctggg
cccacggtggaaccggcctccgcgcccccgcgcagcccacacgtgcagcccacggaggag
accgcggctcacgtggccccccgggatgaccccacggagcaggggagagcccctgacagc
cctgagccgcccccggggaggctggagaccggccgggaccaggcttccgccgtacccact
gcctccacggcgggcccggacacgaaggaggagaacatcgccggcgtcggagccaagatc
ctgaacgtggcccagggcatccgcagcttcgtccagctgtgggacggcaccactcccagc
cagagctccaccggggcggagacgccagcccctgggacccccacggcccccctcaccctc
ccggggccctccggcgtccccccggaggacgggaccactctctggctgagcagtagggcc
ctgacctctccggacacccagaggaccgaggctggcaccctgccagtgcccacccagctg
cctccctcccccggcaggccccgggcaccgctcagggagccctctgtgccgccatcttct
ccaggtagagcttctctctcctctgtgccgggcggggcccctccccgggggacacagccg
tccccgaggcggccccacgatctggacggcggaggaccctcccccgtggccgcccgtgct
cgccggcagcgccgactcgctgacagccgcaggcccgcgccgcatctgcttccgctggtg
acgggtctcccgggcgcccacgctgcccccttggctctgtcctctgacctccccgccctg
gtgtctccgatcccactccccgctgtcaccggggacaagggtgcttgggctcctcacgtg
gctaactctgtggggcctggtctcgctaataactccgcgctgcccggggctgacctgccg
acccccacccggcagcctgcccgccccgccggccgctgcctgcccctgccgccctccctg
ccggtctgcggtcacctgggcatcgggcgctcctggctgcccaaccacctccggcacgcc
agcagcgaggaggtgcgggccgcggcgcgggcgtgggggcccctcctccggacgcactgc
caccgcttcctcgcctggttcttctgcctgctgctggccccgccctgcggtgctggcccg
ctgcccgcccctccgccctgccgccagttctgcgaggccctggaggatgcgtgctggagc
cacctggacgggggcgggctgccggtcacctgtgcctcgctcccggcccaggaggacggg
gtctgcgtgttcattgggccgggtgcagagagcctgggcacggaggtggggctcctgcag
ctgctcggagagccgccgccccagcaggtcgcccaggtggacgaccctgacgtcgggccg
gccttcgtcttcggcccggatgccaacagcggccaggtggcccggtaccacttccccaac
ccgttcttccgcgacttctcactgctcttccacatccggcccgccaccgagggcgcgggg
gtgctgttcgccatcacggacgcggcccaggcggtggtctccgtgggcgtgaagctgtcg
gccgtgcgtgacgggcagcagcacatccagctcctgtacaccgagcccggcgccacccgc
acccgcacggccgccagcttccgcctgcccaccttcaccggccagtggacgcgcttcgcg
ctcagcgtggacggcgcgaccgtggcgctgttcgtggactgcgagctgttccagagggtg
cccttggtgcgctccccgcgggccctggagctggagcccggcgccggcctcttcgtggcc
caggctggaggagcagaccccagcaagttccagggaaggatcgcggagctgagggtgcgc
ggagacccccgggtgagccccctgcactgtctggaggaggacgacgaggacagcggtggg
gtgtctggagacttcgggagcgggctggaggagaaccgggagcttctcagggagcagtcg
ggtctgtccccaaagcccagcctccccgaggctccaccggtcacttctccgcccttggct
ggaggcaggaatgtggaagattccagaactgaagagattgaggaagaaaccacgatgtct
tcgttgggagcttggaccctccccggctcagacaccgtcaccgcatggagcgttcggagc
cctgggggcggcccggaagagggtcctgcaggctctgcagtacagagccccgatatgcag
cctgtacccgggccacagggccccccgggccccccagggccaccggggaaggacggtgct
cccggaaaggacggtgagccgggcgatcctggtgaagacgggaaacctggtgaccctggg
ccacagggcttccccgggaccccaggagacatgggccccaagggcgagaagggggaccct
ggggtcgggccaagaggacccccaggaccccaagggcctccagggccaccaggaccctcc
ttcagacacgacaggctgaccttcattgacatggaggggtccgggttcggcggtgacctg
gagagtctccgaggcccgagaggcttccccggccccccggggccccccggcgtcccaggc
ctgcctggagagccaggccgctttgggatgaacagctccgacgtcccaggccccgcaggc
cttcctggagtgcctgggcgggacggggcccccgggcttcctggcgccctgggacctcca
ggtcctccaggaagagacgggggaccaggaaagactggccagaaaggcagccccggcgaa
gcgggcgccccgggacctaagggaagcaagggggaccctggccccactggcgctcctggg
gagactggcttggcaggagcccccggaccagctggaccaccagggccccccgggcccccc
gggcctccaggaccaggacttgccgcggggtttgaggacatggacggctctgggggaccc
ttctgggcaactgctcacggggccagcgggccacagggaccaccaggcctgccgggggtc
aagggggaccctggaatagccggaccaccaggcgccaagggagaagtcggagccgatgga
cctcccgggttccccggcctccctggcagagagggcacagccggagcccagggacccaaa
ggagaaaaagggacccagggagagaaaggtgacccagggagggatggagtggggcagcct
ggcctccccggaccccccgggcccccaggacctgtcgtctacgtgtcggagcaggacaga
gcggtggcaggcgtgccgggacctgagggccggccggggtacgcaggctttcctggaccg
gctgggccaaagggagatctgggctccaaaggccagcggggccccccgggacccaagggc
gagaagggcgagccgggcccggtcttcagccccgatggcggcacgctgggccctgcccag
aaaggagccaagggagagcccggcttccgaggaccgccgggtccatatggacggccgggg
cacaaaggggagattggcttccctgggcggccgggtcgccccgggatgaacggactgaaa
ggcgagaaaggggagccaggacacgccagcgtcggctttggtgtgaggggcccacccggt
cccccggggcctccaggacccccaggccctcccgggactcccgtctatgacagcaacgcc
ttcatggagtctggccgccctggacctccaggattaccagggtaccaggggcctcctgga
ccgaagggtgacaaaggagaagtgggcccaccaggaccaccagggcagttcccgctcgac
ctcctccagctggaggctgaaatgaagggggagaagggtgatagaggagacccggggcag
aagggcgaacggggtgagcccgggggtggcggattcttcggctccagtgtgcccggcccc
cccggcccgccaggctaccctgggattccgggtcccaagggagagagcattcggggccag
ccaggcccacctggacctcaggggccccctggcatcggccatgaggggcgtcaggggcct
cctggcccccccggcccccccgggcccccagggcccccttccttccccggcccttacagg
cagacgatcagtgttcccggccccccaggcccacctgggccccccggaccccctggaacc
atgggcacctcctcagggcaggtaaggatctgggccacgtaccagaccatgctggacaag
gtgccggaggttccggagggctggctcatctttgtggctgagacagaggagctgtacgtc
cgggtccggaatgggttccggaaggtcctgctggaggcgcggacacccctcccacgtggg
acggacaacgaggtggccgccctacagcccccgctggtgcagctgcacgagggccacccg
tacccccggcgggagctcacccactccacggcgcggccctggcgggcggatgacatcctg
gccggccccccgcgcctgccggccccccggccctaccctggcgccccccaccacggcccc
tacctgcacgtccagccggctcgccccaccggcgggcccgcccgcacccacgcccaccag
gacttccagcccgtgctccacctggtcgcactcaacagcccccagccgggcggcatgcgc
ggcatccggggcgcggacttccagtgctttcagcaggcgcgcgccgtggggctggcgggc
actttccgcgccttcctgtcctcacggctgcaggacctctacagcatcgtgcgccgcgcc
gaccgcacgggcgtgcccatcgtcaacctccgggatgaggtgctgtttcccagctgggag
gccttgttctccggctcctccgagggccagctgaagcccggggcccgcgtcttctctttc
gatggcagagacgtcctccagcatcctgcctggcctcagaagagcgtgtggcacggctcg
gaccccagcgggcgccgtctgaccgacagctactgcgagacgtggcggacagaggacgcg
gcggcggctggccaggcctcctcgctgctggcgggcaggctgctggcgcagaaagccgcg
agctgccgcaacgccttcatcgtgctctgcatcgagaacagcttcatgacctcctcctcc
aagtag
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