Felis catus (domestic cat): 101087493
Help
Entry
101087493 CDS
T02385
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04151
PI3K-Akt signaling pathway
fca04510
Focal adhesion
fca04512
ECM-receptor interaction
fca04974
Protein digestion and absorption
fca05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101087493 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101087493 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101087493 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101087493 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101087493 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101087493 (COL2A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101087493 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
101087493
NCBI-ProteinID:
XP_044917614
LinkDB
All DBs
Position
B4:complement(74774242..74805433)
Genome browser
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEVAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaaccg
ggaccaaagggacagaaaggagaacccggagacattaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggcgacaaa
ggtgaaaaaggtgcccctggaccgcgtggcagagacggagagcctgggacccctggaaat
cccggcccccctggtcctcctggcccccctggcccccctggcctcggtggaaactttgct
gcccagatggccggaggatttgatgagaaggctggtggtgcccagatgggagtgatgcaa
gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggagaacctggggaacccggtgtctctggtcccatgggt
ccccgcggtcctcctggcccccccggaaagcctggcgatgatggtgaagccggaaagcct
ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggtgagagtggttcaccgggtgagaatggttctccg
ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccctgctggggct
gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggtgctcccggtgccaagggtgaagctggccccact
ggtgctcgaggtcccgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc
cctggaccggccggtgcctctggtaaccctggaactgatggaattcctggagccaaagga
tctgctggtgctccgggcatcgctggtgctcccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactggtccgctgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga
gcccctggtcctgctggtgaggaaggcaagagaggtgcccgtggagagcctggtggtgct
gggcccgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaa
gatggtctggcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggc
cccaagggtgccaacggcgatcctggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggacgccccggtgatgccggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggc
gtcatgggtttccccggccccaaaggtgccaatggcgaacctggcaaggctggtgagaag
ggacttcccggtgcccctggactgagaggtcttcctggcaaagatggtgagaccggtgct
gcggggccccccggacccgctggacctgccggtgaacgaggcgagcagggtgcccctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaagcca
ggtgaccagggtgttcctggtgaagctggagcccccggccttgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc
ctccctggcactcctggcacggacggccccaaaggcgcatctggcccagccggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccctggg
aaggacggtggacgaggcctgactggtcccattggcccccctggccctgccggtgccaat
ggtgagaagggagaagttggacctcctggtcctgcgggaactgctggtgctcgtggagcc
ccgggtgaacgtggagagaccggcccccccgggcccgctggattcgcaggacctcccggt
gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctggacctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccctgga
gctgctggccgtgtcggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagcggcccccctggccgt
gctggtgaccctggcctccaaggtcctgccgggccccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcaaagg
ggcattgttggtcttcctgggcaacgtggtgagagaggattccccggcctgcctggccca
tcgggtgagcctggcaagcagggagctcccggagcatctggagaccgaggtccccccggc
cccgtgggtcctcctggcctgactggtccttctggcgaacctggacgagagggaagccct
ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag
actggtcccgtgggtgctcctggagcccctgggccccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccctgca
ggaccagccggagcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggcctgaagggacaccgtggcttcactggtctgcagggt
ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaatggaatc
cctggccccattggacctcctggtccccgcggacgttcgggcgaaactggcccggctggt
cctcctggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagctggcaacctgagacagcacgacgccgaggtggatgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgagtgttcccaagaagaactggtggagcagcaag
agcaaggacaagaagcacatctggttcggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccaccgagggctcccagaatatcacctaccactgcaagaacagcattgcctacctg
gatgaagtggctggcaacctcaagaaggccctgctcatccagggctccaatgatgtggag
atccgggctgagggcaacagcaggttcacatatactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcacgtctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
