Felis catus (domestic cat): 101089400
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Entry
101089400 CDS
T02385
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X2
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
fca
Felis catus (domestic cat)
Pathway
fca03082
ATP-dependent chromatin remodeling
fca03250
Viral life cycle - HIV-1
fca04714
Thermogenesis
fca05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101089400 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101089400 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101089400 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101089400 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fca01009
]
101089400 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fca03021
]
101089400 (SMARCB1)
03036 Chromosome and associated proteins [BR:
fca03036
]
101089400 (SMARCB1)
Protein phosphatases and associated proteins [BR:
fca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101089400 (SMARCB1)
Transcription machinery [BR:
fca03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101089400 (SMARCB1)
SWI/SNF complex
101089400 (SMARCB1)
Chromosome and associated proteins [BR:
fca03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101089400 (SMARCB1)
PBAF complex
101089400 (SMARCB1)
SWI/SNF complex
101089400 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
101089400
NCBI-ProteinID:
XP_003995029
LinkDB
All DBs
Position
D3:29831147..29865249
Genome browser
AA seq
376 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYP
TDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctagaa
gacgacggagaattctacatgatcggctctgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatgatcatggatacacaaccctggccaccagcgtgacg
ctgttaaaagcttcagaggtggaagagattctggacggcaatgatgagaagtacaaggcc
gtctccatcagcacggaaccccccacctacctcagggaacagaaagccaagaggaacagc
caatgggtgcccaccctgcccaatagctcccaccatctggatgctgtgccctgctccacg
accatcaacaggaaccgcatgggccgggacaagaagagaaccttccctctgtgctttgat
gaccacgacccagctgtgatccatgagaatgcctcccagcctgaagtgctggtccctatc
cggctggacatggagatcgacgggcagaagctgcgagatgcctttacttggaacatgaat
gagaagctgatgactcctgagatgttttcagaaatcctctgtgatgacctggatttgaac
cctctgacatttgtgccagccatcgcctctgccatcaggcagcagatagagtcctacccc
acagacagcatcttggaggaccagtctgaccagcgtgtcatcatcaagctgaatatccac
gtgggaaacatttcgctggtggaccagtttgagtgggacatgtcagagaaggagaactca
ccagagaaatttgccctgaagctgtgctcagagctggggctgggcggggagtttgtcacc
accatcgcgtacagcattcggggacagctgagctggcatcagaagacctatgccttcagt
gagaaccccctacccacggtggagattgccatccggaacacaggcgatgctgaccaatgg
tgcccactgctggagactctgacagacgctgagatggaaaagaagatccgagaccaggac
aggaacacaaggcgtatgaggcgtcttgccaacactgccccagcttggtaa
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integrated database retrieval system
