Felis catus (domestic cat): 101089773
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Entry
101089773 CDS
T02385
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
fca
Felis catus (domestic cat)
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fca03021
]
101089773 (SCAF8)
03041 Spliceosome [BR:
fca03041
]
101089773 (SCAF8)
Transcription machinery [BR:
fca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101089773 (SCAF8)
Spliceosome [BR:
fca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101089773 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101089773
NCBI-ProteinID:
XP_023110288
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All DBs
Position
B2:138924263..139015672
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AA seq
1336 aa
AA seq
DB search
MPQPLLPALPPPSSLCAAGSCGPSGGECSGRRLFRRRARGLRTDNMEAVKTFNSEDCAST
PACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKC
KPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVL
NLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGL
PDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQPSILQALDAGLVVQLQ
ALTAQLTAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEISASQLSHVSES
VNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQH
FLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKR
RSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSV
CSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSS
GSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQET
VNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSL
VPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTS
LVQPPLSMTPETVKDVGFGSLVLPGGSVASNLATSALPAGNVFNPPTKQAEPEEKVPHLI
DHQIPSAENTRSVIPNDISSSSAILGGQPPNVTSNSGILGVQRPNVSSNSEIIGVRPSNV
SSSAGIIGPQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNNSGLIGVQPPNVPNTA
GLLGTQPPAGPQNLPPLNLPGQRMPAMPMLDIRPGLIPQTPGPRFPLIQPGIPPQRGIPP
PSVLDSALHPPPRGPFPPGDIFSQPERPFLVPGRQSVDSVTNPEKRIPLGNDNIQQEGDR
DYRFPPMEARESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRP
GIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSG
PWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARV
FDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTVA
DIESEPVVESTETEGT
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgctgctgccagcgcttcctcctccgtcttcgctgtgcgctgctggttcc
tgcggcccgagcggcggggagtgcagtggccgccgcctcttccgccgccgggctcggggc
ctccgcaccgacaacatggaggctgtgaaaaccttcaatagcgaggattgtgcctctact
cctgcttgtacagactgcttttccagcagcatggacacaagaagcatattgtattccctg
aatgactataaaccacccatttctaaagccaaaatgacccaaattactaaggctgccatc
aaagctattaagttctataaacacgtggtacagagtgttgagaaattcattcagaaatgt
aaaccagaatacaaggtacctggactttatgttattgactctattgtacgacaatctcga
catcagtttggtcaagaaaaggatgtgtttgcacccagatttagtaataacatcattagt
actttccagaatttatatcgttgccctggggatgataagagtaaaatagtgagagtatta
aacttatggcagaaaaataatgtgtttaagagtgaaattattcagcctcttctggatatg
gcagcagggattcctcccccggttgtcacacctgttttggccagtactactgctgctatg
agcaacaccccaggaacgcctgtgacacctgttactccagccaatgttgttcagggtctg
ccagatccatgggtatctcagataacaaatacagatacacttgccgctgtagctcagatc
ttacaaagtcctcaaggccaacagcttcagcagttgatacaaactttacaactccagcag
cagaagcctcagccttctatcctgcaggccctggatgctgggctggttgtgcagttgcaa
gctctcacggcccagctgacggcggcagctgcagcggccaacaccctgaaccccttagaa
cagggggtgtctttcaacaagaagttgatggataggtttgattttggggaagattctgag
catagtgaagaacccaaaaaggaaatttcagcttctcaactttctcatgtttcagaatct
gtgaacaattcaatttttcatcagatagcagaacaactacagcagcaaaaccttgaacat
ctcagacagcagctcctggaacagcaacagcctcaaaaggcaacccctcaggatagtcag
gaaggaacatttggatcagaacattcagcatcaccatcacaagggagcagtcagcagcat
ttcctcgaacctgaagcaaatttggatgattctatagatattcagcaacaggacatggat
atagatgaagggcaagatggagtggaagaggagatcttcgaacaagaagcaaaaaaagtg
gctgttcgctcaagatcaagaacacattcacgatctcgttcaagatcgccaaggaaacga
aggtctcggtcgcgatctggttctcgaaagcgtaaacacagaaagcgatcacgctcacgc
tcaagagaaagaaagaggaaatcatcacgttcatactcaagtgaaaggagagcaagagaa
agggagaaagaacgacagaagaagggattacctccaattagatctaaaacattaagtgta
tgtagtactactttatgggttggtcaggtggataagaaggcaacccagcaagatttaacc
aatctgtttgaagagtttggacaaattgaatccattaatatgattcctcccaggggctgt
gcgtatgtctgcatggttcaccgacaagatgctttccgggctcttcagaaacttagttct
ggatcatataaaattgggtccaaggtcattaagattgcttgggctttaaacaaaggtgta
aaaacagaatataaacaattttgggatgtggatcttggagttacatacataccatgggaa
aaagttaaagtggatgacttggaaggttttgcagaaggaggcatgattgaccaggaaact
gtaaatactgagtgggaaactgtgaaaagctcagaacctgttaaagagacggtccagaca
actcagagcccaactccagttgaaaaggagacagtggtcacaacccaggcagaggttttt
cctccacctgttgctatgttacagattccagtggcgccagctgtgcctacagttagttta
gttccaccagcatttccggtctccatgccggttcctcctcctggattcagtccaatccct
ccacctccttttctgcgagcgagttttaacccttcacaaccacctcctggtttcatgcca
cctccagttccaccacctgttgtaccgccacctgctattccaccagtagtaccaacatct
ttagtgcagccgccattatccatgactccagaaaccgtgaaagatgttggatttggtagt
cttgttttaccgggtggttctgttgccagcaatcttgctacttctgctctgccagctgga
aatgtttttaatcctccaactaaacaagcagagcctgaagaaaaagtacctcatcttata
gaccaccagattccttctgctgaaaacaccagatcagtgattccaaatgatatttcaagt
agctctgcaattttaggaggacagccaccaaatgtgacaagcaattctggaattttggga
gtccaaagaccaaatgtgtcgagtaattctgaaattattggagtccggccatctaatgtt
tccagtagtgctgggattattggaccccagccaccaaatattctaaataactctggaatt
ttgggactacagccaccaactgtgtcaagtagttctggacttttgggagtgctaccccca
aatattcctaataattcgggactaataggagtacagccaccaaatgttccaaacactgct
ggacttttgggaacacagccaccagccgggcctcaaaacttaccccctttaaatctccct
ggtcaaaggatgcctgcaatgccaatgttagacattcgtccgggactaataccacagaca
cctggaccaagattccctttaatacagcctggaatcccaccccagcggggaatccctccc
ccgtcggtacttgattcagctcttcatccaccaccccgtggtccgtttcctccaggagat
atttttagtcagccagaaagaccttttctggttcctggaagacaaagtgtagacagtgtt
actaatccagagaaaaggataccactcgggaatgataacattcaacaggaaggagataga
gattaccggtttcctcccatggaagccagggaaagcattagtagacctcccccggtggat
gttagggatgtggttggacggcctatagatccaagagaaggtcctggaaggcctccatta
gatggtagggatcattttggaagacctcctgttgatattagagagaatcttgtgaggcca
ggcatagatcatcttggtcgaagagaccactttggctttaatccagagaagccctggggg
cacagagattttgatgagagagaacatcgggttctgcctgtctatggtggtccaaaaggc
ttacatgaagaaagaggtcgatttcggtctggaaattatcgatttgatcctagaagtggt
ccttggaacagaggatttggacaagaagttcacagagattttgatgaccgcagaagaccc
tgggagaggcaaagggatagggatgacagagattttgatttctgcagagaaattaatgga
aaccgtcttggacgagatagaattcaaaacacctgggtcccccctcctcatgctcgggtt
tttgatttttttgaaggggccacttctcaacgaaaaggtgataacgtgcctcaggttaac
ggtgaaaatactgagagacatgcccaaccaccacctttaccagtacagaatgatcctgaa
ctttatgaaaaactgacatcttcaagtgaaataaacaaggagaagagtgacacagttgct
gatatagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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