Felis catus (domestic cat): 101089823
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Entry
101089823 CDS
T02385
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
fca
Felis catus (domestic cat)
Pathway
fca03410
Base excision repair
fca04140
Autophagy - animal
fca04217
Necroptosis
fca04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101089823 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101089823 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
101089823 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101089823 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fca03036
]
101089823 (HMGB1)
03400 DNA repair and recombination proteins [BR:
fca03400
]
101089823 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fca04147
]
101089823 (HMGB1)
Chromosome and associated proteins [BR:
fca03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
101089823 (HMGB1)
DNA repair and recombination proteins [BR:
fca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101089823 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
101089823 (HMGB1)
Exosome [BR:
fca04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101089823 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
101089823
NCBI-ProteinID:
XP_003980327
UniProt:
M3VUA1
LinkDB
All DBs
Position
A1:complement(9738599..9744913)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatcccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcagatgac
aagcagccttatgagaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgacgcggcaaaaaagggagtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaggacgaggaagatgaagaggatgaggaagaggag
gaagatgaagaagatgaagaagaagaagaagatgatgatgatgaataa
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integrated database retrieval system