Felis catus (domestic cat): 101089931
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Entry
101089931 CDS
T02385
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X2
KO
K13126
polyadenylate-binding protein
Organism
fca
Felis catus (domestic cat)
Pathway
fca03015
mRNA surveillance pathway
fca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101089931 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
101089931 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fca03019
]
101089931 (PABPC1L)
03041 Spliceosome [BR:
fca03041
]
101089931 (PABPC1L)
Messenger RNA biogenesis [BR:
fca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101089931 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
101089931 (PABPC1L)
Spliceosome [BR:
fca03041
]
Complex C
Other components
Complex C specific factors
101089931 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_7
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
101089931
NCBI-ProteinID:
XP_003983574
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All DBs
Position
A3:complement(15799396..15820702)
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AA seq
616 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIRGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDNHGSRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHFKSRRERE
AELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEK
HEEAQKAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKN
LDDSIDDEKLRREFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQPPAQTAY
YASSSPMQPAPRWTAQPPRPSSTYPPAASMIRPPAMLRRPPAQVSGVRQASTQVPPTVPH
TQRVANIGTQTTGASGAGYPAPSGPLLTHKYSSATYNHGVQEPAVRIPGQEPLTASMLAA
APLHEQKQMIGERLYPLIYDAHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALA
VLQAHQAAELTKVNVL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccgggctacccgctcgcctcgctctatgtgggcgacctgcacccc
gacgtgaccgaggccatgctgtatgagaagttctcgcccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctacgcctacatcaacttccag
cagcccgccgacgcggagcgggcactggacaccatgaacttcgaagtgatcagaggacag
cccatccgcatcatgtggtcccagcgggacccaggactccgcaagtcgggtgtgggcaac
atcttcatcaagaacctggaggactccatagacaacaaggccttatatgacaccttctcc
acctttgggaacatcctctcttgcaaggtggtgtgtgacaatcacggttcccgaggcttc
ggcttcgtccactttgaaacccatgaggccgctcagcaggccatcgtcaccatgaacggg
atgctgctgaatgaccgcaaagtctttgttggccacttcaagtctcgacgggagagggaa
gcagagctgggagctcgggccatggagttcaccaacatttatgtgaagaacctccacgtg
gacgtggacgagcagggcctacaggacctcttctcccagtttgggaagatgctgagtgtg
aaggtgatgagggatgacagcggccactcccggggcttcggctttgtcaactttgagaag
catgaggaagcccagaaggccgtgacggacatgaatgggaaggaggtgagagggcggcta
ctgtacgtgggccgggcccagaagcgggtggaaaggcagaatgagctgaagcgtaggttc
gagcagatgaagcaggaccggctgacccgctaccagggtgtgaacctgtatgttaagaac
ctggatgactccatcgatgatgagaagctgagaagagagttctctccctatggagtgatt
accagtgccaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctctccagaagaggcgacaaaggccgtgacagagatgaacgggcgcatcgtgggcacc
aagccgctctacgtggccctggcccagcgcaaagaggaacggaaggccatcttgaccaac
cagtacatgcagcgcctgtctactgtgcgggccctgggtggccccctcttgggctccttc
cagcagcccgccagctacttcctgcccgctgtgccccagcctcctgcccagactgcgtac
tatgcgtccagctctcccatgcagcctgcccccaggtggacggcccagcctccgagaccc
tcgtccacctaccctccagctgcctcaatgatccgaccaccagccatgttgcggcgcccc
ccggcgcaggtcagcggtgtcaggcaggcctccacccaggtgccacccacggtgccccac
acccagagagtggccaatattggtacccagaccacaggagccagcggggcgggatatcct
gcaccaagtgggcctctgctgacacacaaatattcctcagcaacatacaaccacggggtc
caggagcctgctgtgcgcatcccgggacaggagcccctgacggcgtccatgctggccgca
gcgccactgcacgaacaaaagcagatgatcggtgagcgtctgtacccccttatctacgat
gcccacacccagctggctggcaagatcacgggcatgctgctggagatcgacaactcagag
ttgctgctcatgctggagtcccccgagtccctcaatgccaaggtggaagaggctttggcg
gtgctgcaggcacaccaggccgcggagctgacaaaagtgaatgtgctctga
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integrated database retrieval system
