Felis catus (domestic cat): 101092700
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Entry
101092700 CDS
T02385
Symbol
COL24A1
Name
(RefSeq) collagen alpha-1(XXIV) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04820
Cytoskeleton in muscle cells
fca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101092700 (COL24A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101092700 (COL24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101092700 (COL24A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101092700 (COL24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101092700
NCBI-ProteinID:
XP_019692917
UniProt:
A0A2I2UVY3
LinkDB
All DBs
Position
C1:complement(72237201..72649201)
Genome browser
AA seq
1708 aa
AA seq
DB search
MHLGAHRTRRGKVSHTAKTKLLLHFIVLCVADSAVHAQEQGIDILHQLGLGDKDVRHSSS
VTAVPSSSTPLPQGVHLTESGVILTNDAYIESPLMKILPFNLEQPFTILIGLQSHRVNNA
FLFSIRNKNRLQLGVQLLPKKLVVYLGGKQSVFFNYSVHDERWHFFAITIRNQVVSMSVE
CGKKYFSRETLLEVQTFDSNSVFTLGSMNNNSVHFEGIVCQLDIIPSAEASANYCRYVKH
RCHPETNHLHTTIVPAEILENSPLPKQFGEKVLSEDTFTKGKNIPNIINNDSATVHKQQE
HQISKSQFISLHSRNVSAVDLVNHGIQDKEMITEEHTQTNLSLSMTHHLKKAKTNSKEKF
SSFSNVSDNVTQHNDKLTGLSPFKKISSILPHIKQETITNLKKAITANLHTNELMELQQI
LNTTLYRVTDEPSVDNHLDLRKEGEIDPDATYPIENSYETDLYDYYYYYEDLNTMLEMEN
LRGPKGDTGPPGPPGPAGIPGPSGRRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQA
VPGKKGSQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEPGIPGFTGNIGSRGYPGRQGVAG
PEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGFPGDFGDRGPAGPDG
SPGLVGSIGPPGFPGLRGSVGPIGPFGPSGIPGPVGLSGNKGLPGIKGDKGEQGIAGEPG
EPGYPGDKGAVGVPGPPGMRGKPGPTGQMGDPGPQGPCGPPGPEGFPGDIGIPGQNGPEG
SKGLLGNRGPPGPPGLKGPQGEEGPVGLFGELGARGKPGQKGYAGEPGPEGLKGEVGDQG
NVGKIGETGPVGLPGEVGITGSIGEKGERGSPGPQGPQGEKGVMGYPGPPGDPGPIGALG
LPGHVGARGPPGSQGPKGQRGPRGPDGLIGEQGIQGSKGEKGDQGKRGPYGLTGKTGNPG
ERGIQGKPGLQGPPGSTGDRGLEGEPGPRGLPGDAGPPGETGAEGPSGIEGEAGLQGEPG
AKGNAGPTGNVGVVGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPG
ASGPLGGPGLMGPPGSEGIVGIPGQRGRPGKKGEKGQIGPTGEIGSRGAPGQIGGSGPKG
ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVLGPPGPR
GEPGPVGEQGERGEPGAEGYKGHMGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPK
GKKGTPGPAGKPGIPGLPGLPGPKGMQGYHGADGISGNSGKVGLPGKQGLPGTRGSPGRA
GPAGSPGPRGAKGPSGLPGSPGVPGPKGEQGLSGQPGIQGKRGHGGAQGDQGPRGEPGLK
GQPGEHGVQGLTGFQGFPGPRGPEGDAGIIGISGPKGPVGQRGNTGPFGKEGIIGPTGRT
GPRGEKGFRGETGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESHAALQMESYQNT
EVTLIDYGAEISKTLNYLSNLLHSIKNPLGTRDNPARICRDLLNCEHKVSDGKYWIDPNL
GCPSDAIEVFCNFSAGGQTCLSPVSVTKLEFGVGKVQMNFLHLLSSEATHIITIHCLNTP
VWTSAQSSGSGLPIGFKGWNGQIFEENTLLEPKVLSDDCKIQDGSWHKAKFLFHTQDPNQ
LPVIEVQKLPHLKTERKYYIESSSVCFL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaggagcccacaggacaaggcgtggaaaggtctcccacacggcaaaaacgaaa
ctgcttcttcattttattgtgctatgtgtggcagacagtgctgttcatgcacaagaacaa
ggcatagatattcttcatcaactaggccttggagacaaagatgtaagacactcatcatca
gtgactgctgtaccatcatcatctacaccattacctcagggggtccatttaacagaatca
ggtgtcattttaacaaatgatgcttatattgagtcacctctcatgaaaattttaccattc
aacttagaacagccatttacaatattaattgggttacagtcacatagagtaaacaatgca
tttctcttcagcattagaaataaaaatagactgcaattaggagtgcaattattacctaaa
aaattagtagtataccttggaggaaagcagtctgtgtttttcaactacagtgttcatgat
gagcgatggcacttctttgccattactattagaaaccaagttgtttcaatgtctgttgag
tgtggaaagaaatattttagcagagagactcttttggaagtccagacttttgattctaac
agtgtgtttacactaggaagtatgaataataattctgtccattttgaaggaatagtatgt
cagttggatattattccttctgcagaagcatctgcaaactattgtagatatgtgaaacat
cgttgtcaccctgagacaaaccatcttcatacaaccatcgtaccagctgagatactggaa
aactctcccttgcccaaacaatttggtgaaaaagtgctgtctgaggacacatttaccaaa
ggcaaaaacattccaaatatcataaataatgattctgcaacagtccataagcaacaagaa
caccaaatatcaaaatctcaattcatttctcttcattcaaggaatgtttctgctgtggat
cttgtaaaccatgggattcaagacaaagaaatgatcactgaggaacatactcagacaaat
ttaagtctgtcaatgacccatcatctcaaaaaggcgaaaacaaatagcaaggagaaattt
agttctttttcaaatgtatccgacaatgtcacacaacataatgataaactaactggtctg
tcaccatttaagaagatatcatctattcttccacatataaaacaagaaacaattactaat
ctcaagaaagctatcacagcaaatctacacactaatgaactcatggaactgcaacagatt
ttaaatacaaccttatacagagtgacagatgagccatctgtggacaatcaccttgaccta
aggaaggaaggtgaaattgatcctgatgctacctatcccatcgaaaatagctatgagact
gacctttatgattattattattattatgaggatcttaatacaatgctcgaaatggagaat
ctgagagggccaaaaggggacactggacctcccggtccacctggtccagcaggcatccca
ggcccatcaggaaggagaggtccacggggcataccagggccacatggaaatcctgggtta
cctggattaccaggtccaaagggccccaaaggagatccaggactttcccctggtcaagct
gttcctggaaaaaagggcagtcaaggcctttctggattaatgggcccccctggtatgcaa
ggtgataagggtctcaaaggccatccgggcctcccaggtctccgaggtgaaccaggaatt
ccaggattcactggtaatattggttcacgtggttaccctggcaggcagggtgtagctgga
ccagaaggtaatccaggtcctaaaggtatacgaggttttattggctctcctggagaagta
ggacaactgggacctgaaggagaaagaggtgttcctgggatccggggaaagaagggtctt
aagggaagacagggttttccaggtgactttggagacagaggccctgctggccctgatggc
agtcctggacttgtaggtagcattggccctccaggatttcctgggcttagaggcagtgtt
ggccctattggaccatttggaccttctggaattcctggccctgtgggtctttccgggaat
aagggcctacctggaatcaaaggtgataagggtgagcaaggcattgcaggagagccagga
gaaccagggtatcctggagacaagggtgctgttggtgttccaggaccaccagggatgaga
ggaaagccaggacctacaggccaaatgggtgacccaggaccccaaggaccatgtggccct
ccaggaccagagggttttccaggagatattgggattcctggacaaaatggccctgaagga
tctaagggactccttggaaataggggacctccaggacctcctggtctcaaaggacctcag
ggagaagaaggaccagttggactctttggagaactgggagcaagaggaaaaccaggtcaa
aaggggtatgcaggtgaaccaggaccagaaggcttaaagggagaagtaggagatcaagga
aacgttggaaagattggtgaaacaggacctgtcggtttacctggagaagttgggattact
ggaagcattggtgaaaagggagaacgtggaagtccaggtccacaaggtccccagggggaa
aagggtgtcatgggatatccaggtcctcccggggatccaggacccattggtgccctggga
ttacctggtcatgtgggagcaagaggaccacctggaagtcaaggtcctaaaggacaaaga
ggaccaagaggaccagatggtctcataggggaacaaggtatacaaggttccaagggtgaa
aaaggagatcaaggaaaaagagggccttatggtcttactggtaagactggaaaccctgga
gagagaggaattcaagggaaaccaggtttacaaggaccccctgggagtacaggagacaga
ggacttgaaggagaaccaggaccacgaggattgccaggtgatgctggacctcctggagaa
acgggtgctgagggcccttcaggtattgagggagaagcaggtctgcaaggtgaaccaggt
gcaaagggaaatgctggacctacaggcaatgttggagttgtgggagaaccagggttacgg
ggtgaaccaggagcacctggagaagaaggtctccaaggaaaagatggattaaagggaaac
ccaggaggaaggggtcttcctggagaagatggagaaaaaggagagacgggcttaccaggg
gcttcaggacccttgggtggaccaggtctgatgggtcctccgggatctgaaggaattgtg
ggaattccagggcaaagaggtcgcccaggcaaaaagggtgaaaaaggacaaattgggccc
accggagaaattggaagcagaggtgctcccggacaaattgggggaagtggtcctaagggt
gccagaggaacaagaggtgctgtgggacatttaggattgatgggacctgatggagaacca
ggaattccaggatataggggccaccagggccagccaggcctttctgggctgccaggacct
aaaggagaaaagggttatccaggagaagatagcacagtgctaggaccacctgggcctcga
ggtgaaccaggtcctgtgggggaacaaggagagagaggagagcctggagcagagggctat
aagggtcacatgggtataccaggaccaagaggtgctactggacaacaagggcccccaggt
gagccaggtgaccagggtgaacaaggactaaaaggagagagaggatctgaaggtcctaaa
gggaaaaaaggcactcctggccctgctgggaaacctgggattcctggtcttccaggccta
cctgggccaaaaggcatgcaaggataccatggagccgatggcatttcaggaaactctgga
aaagttgggctaccaggaaaacagggacttcccggcaccagaggcagcccaggaagagca
ggaccagctgggtctccaggtcctcgaggagccaaggggccatcaggccttccaggaagc
ccaggggttccaggcccaaagggagaacaaggactatctggacaacctggaattcaaggt
aaaagaggccacggaggagcacaaggtgatcaaggaccacgtggagagcctggccttaaa
gggcagcctggagaacatggtgtccaaggtttgacaggtttccaaggattcccaggcccc
aggggtcctgagggagatgctggcatcattggaatatcaggtcctaaaggtcccgttgga
cagagaggaaacactggcccctttggcaaagaaggtataataggcccaacaggtagaact
ggacccagaggtgaaaaaggctttagaggtgaaactggtccccaagggccaagaggtcaa
ccaggacctccaggtccacctggagcacctggcccaagaaaacaaatggatatcaatgct
gctattcaagccttgattgaatcacatgctgccctacagatggagagctaccaaaatact
gaagtgactctaattgactacggtgcagagatatccaaaaccctgaactaccttagcaat
ttactgcacagcatcaagaatcctcttggcacacgagataacccagcacgaatctgcaga
gatttgcttaactgtgaacacaaagtatcagatggaaaatactggattgatccaaatctt
ggatgcccttcagatgccattgaggttttctgcaatttcagtgctggtggtcagacatgt
ttatctcctgtttctgtaacaaagttggagtttggagttggaaaagtccagatgaacttc
cttcacttactgagctcagaagccacccatatcatcactattcactgtctaaacacacca
gtgtggacaagtgctcagtcaagtggctcaggattacctattggcttcaagggatggaat
ggccagatttttgaagaaaacactctacttgaacctaaggtgctttcagatgactgcaag
attcaagatggcagctggcataaggcaaaattcctttttcacacccaggaccctaatcag
cttccagtaattgaagtacaaaaacttcctcatctcaaaactgaaaggaagtactacatt
gaaagcagttctgtatgctttctctaa
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