Felis catus (domestic cat): 101093359
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Entry
101093359 CDS
T02385
Symbol
COL12A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XII) chain
KO
K08132
collagen type XII alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101093359 (COL12A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fca00535
]
101093359 (COL12A1)
Proteoglycans [BR:
fca00535
]
Extracellular matrix (ECM) proteoglycans
Others
101093359 (COL12A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Ig_DSCAM-DSCAML_C
VWA_2
Pur_ac_phosph_N
Collagen
Interfer-bind
NDNF
DUF4998
Copine
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
101093359
NCBI-ProteinID:
XP_019686429
UniProt:
A0A2I2U432
LinkDB
All DBs
Position
B2:complement(67422428..67538649)
Genome browser
AA seq
3065 aa
AA seq
DB search
MRTRLPPALAALGAALLLSSIEAEVDPPSDLNFKIKDENTVHMSWAKPADPIVGYRITVD
STTDGPSKEFTLAASTTETLLKDLIPEIEYVVTITSYDEVEESVPVIGQLTIQTGGPTKP
GEKKPGKPEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIAALVSAFDIGEEKTRVG
VVQYSSDTRTEFNLSQYYQRDELLAAIKKIPYKGGNTMTGDAIDYLIKNTFTESAGARVG
FPKVAIIITDGKSQDEVEIPARELRSIGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVIEPPSNLIATEVSSKYIKLTWSPSPSP
VTGYKVLLTPMTVGSRQHALSVGPQTTALSVRDLSADTEYQISVSAMKGLTSSEPVSIME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLVKSFEISPTRVQIS
LVQYSRDPHTEFTLKKFNKVEDIIEAINTFPYRGGSTNTGKAMTYVREKIFVPSKGSRGN
VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPAETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDLSFSEVTSYSFKTNWSPAGENVF
SYHITYKEATGDDEVTVVEPASSTSVILNNLKPETLYLVNVTAEYEDGFSIPLAGEETTA
EVKGAPRNLKVTDETTDSFKITWTQAPGRVLRYRIIYKPVAGGESKEVTTPANQRRITLE
NLTPDTKYEVAVIPEYFSGPGSPLTGNAATEEVRGNPRDLRVSDPTTSTMKLSWTRAPGK
VKQYLITYTPAAGGETQEVTVTGDTDRTVLRGLNEGTQYALSVTALYASGAGDALFGEGA
TLEERGSPKDLVTKDITDTSIGAYWTSAPGMVRGYRVSWKSLYDDIETGEKSLPRDAIHT
VIENLQPETKYKVSVFAVYSSGEGEPLNGEATTELSPDSKTLKVDEETENTMRVTWKAAP
GKVINYRVVYRPRGGGRQMVAKVPPTVTSTVLKRLQPQTTYDITVLPIYKTGEGKLRQGS
GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVVGPYDN
TVVLEELRAGTTYKVNVFGMFDGGESSPLVGQEMTTLSDTTVMPILSSGMECLTRAEADI
VLLVDGSWSIGRANFRTVRSFISRIVEVFEIGPKRVQIALAQYSGDPRTEWQLNAHRDKK
SLLQAVANLPYKGGNTLTGMALNFIRQQSFKTQAGMRPRARKIGVLITDGKSQDDVEAPS
KKLKDEGVELFAIGIKNADEDELKMIATDPDDIHAYNVADFESLSRIVDDLTINLCNSVK
GPGDLEAPSNLVISERTHRSLRVSWTPPADSVDRYKVEYYPVSGGKRQEFYVSRLESSTV
LKDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSMNIYDISPTSMHVQWQPVGGA
TGYTVTYEPTNATEPAKPKEMRVGPTVNDVQLTDLFPNTEYAVTVQAALHDLTSEPVTAR
EVTLPLPKPRDLRLRDVTHSTMNVFWEPVPGKVRKYIVRYKTPEEDVKEVEVDRSRTSTP
LKDLLSQTLYTVGVSAVYDEGESXPVTAQETTRTVPAPTNLKITEVTPESFRGTWDHGAS
DVSLYRITWAPFGSSDKMETILNGDENTLVFENLNPNTLYEVSVTAIYPDESESDDLTGS
ERTPRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITYQPSTGEGNEQT
TTIGGRQNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTS
TLNVRWDHAEGNPRQYKLFYAPTAGGPEELVPIPGNTNYAILRNLQPDTPYTVTVVPVYA
EGDGGRTSDTGRTLVRGLARNVQVYNPTPNSLDVRWDPAPGPVQQYRIVYSPVAGTRPSE
SMVVPGNTRTVHLERLIPDTPYSVNIVALYSDGEGNPSPGQGRTLPRSGPRNMRVFGETT
NSLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVMLQPLQSDTPYKITVIAV
YEDGDGGHLTGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEP
MEVFVGEMTSYTLHNLNPSTTYDVDVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQVGWD
TFCVRWSPHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTGLSPETDYGVTVFVQTPN
LEGPGVSVKEHTTVKPTEAPTEPPTPPPPPTIPPAREVCKGAKADIVFLTDASWSIGDDN
FNKVVKFIFNTVGAFDEISPAGIQVSFVQYSDEVKSEFKLNTYNDKAQALGALQNIRYRG
GNTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAALVIQQSGFSVFVV
GVADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTS
PGFKMLEAYNLTEKNFASVPGVSLESGSFPSYSAYKLQKNAFVNQPTADLHPNGLPSSYT
IILLFRLLPETPSDPFAIWQITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTD
EVKTLFYGSFHKVHIVVTSKSVKIYIDCYEIIEKDIKEAGNITTDGYEILGKLLKGERKS
ATFQIQSFDIVCSPVWTSRDRCCDIPSRRDEAKCPALPNACTCTQDSVGPPGPPGPAGGP
GAKGPRGERGISGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGEPG
LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPGSPGVTGPSGKPGKPG
DHGRPGPSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMSRFNQMLNQIPNDYHSNR
NQPGPPGPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGIGSPGPRG
LPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCASIPYNGQG
YPGSG
NT seq
9198 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccaggcttcccccagcgcttgccgccctgggcgcggccctgctgctgtcttcc
attgaggcagaagttgacccaccttcagacttgaattttaaaataaaagatgaaaatact
gttcatatgtcatgggcaaaaccagctgatccaattgtgggttacagaataacagtggac
tctacaacagatgggcctagtaaagaatttacccttgcagctagtaccactgaaacttta
ttaaaagaccttatacctgaaatagagtatgtggtgacaatcacttcatatgatgaagta
gaagagagtgtaccagttataggacaattaacaattcaaacaggtggcccaacaaagcca
ggggagaagaaacctggaaaaccagagatacaaaaatgctctgtcagtgcctggactgat
ctggtgttcctcgtggatggctcatggagtgtgggaagaaataattttaagtacatttta
gactttattgctgctcttgtgtccgcttttgacatcggagaagagaagacaagggttgga
gttgttcagtacagctctgataccaggactgaatttaacttaagtcagtactaccaaagg
gatgagcttcttgctgcaattaaaaaaattccatacaaaggtggcaacacaatgacaggg
gatgccattgattacttaattaaaaatactttcacggaatctgctggagcgagagttggc
tttcctaaagtggcaattattattacggatggcaagtcccaggatgaagtggaaattcca
gcaagagagcttcggagtattggggttgaagttttctctttgggcattaaagctgcagat
gcaaaagaactcaaacaaatcgcctccacgccttcattaaaccatgttttcaacgtggcc
aactttgatgcaattgtggatattcagaatgagatcatctctcaggtgtgctcaggtgtt
gatgaacagcttggtgaattggttagtggagaggaagttattgaacctccttcaaatttg
attgccacggaagtgtcatcaaaatacattaaactaacttggagtccatctcctagccca
gtgactggctataaagtcctccttacaccaatgaccgtcggaagccgacagcacgcactc
agtgtggggcctcagaccaccgcactcagtgttcgtgacctttcagcagacacagaatac
cagatcagtgtttctgccatgaagggactgacatccagtgaacccgtttcaataatggag
aagactcagcccatgaaagttcaagtggaatgctcacgtggtgtggatataaaagccgat
attgtgtttttggttgatggttcttatagcattgggattgcaaactttgttaaagttaga
gcctttctggaagttcttgtaaaaagtttcgagatttcaccaactagggtacagataagt
cttgtccagtacagccgggatcctcatactgagttcactttgaaaaaattcaacaaagtt
gaagatataatcgaagcaataaacaccttcccctacagaggaggatctacaaacactggg
aaagcaatgacttatgtcagagagaaaatatttgtgcctagcaagggttcaagaggcaac
gtaccaaaggtcatgattcttatcactgacgggaaatcttcagatgctttcagagatcct
gctataaaactaaggaattccgatgtggaaatctttgcagttggtgtgaaggatgctgtt
cgttcagaattagaagctattgcctctcctcctgctgagacccacgtgttcacagtggaa
gattttgatgcttttcagagaatatcttttgaactcacacagtctatttgccttagaatt
gagcaagagttggcagctataaagaaaaaagcttatgtacctccaaaggatcttagtttt
tctgaggtgacttcttacagtttcaaaacgaactggtctcccgctggagaaaatgttttt
tcataccacatcacctacaaggaagctaccggggatgatgaggtcacagtggtggagcca
gcatcgagcaccagtgtcattctcaacaacttgaagccagagactctgtacttggtcaac
gtaactgcagagtatgaggatggcttcagcattcccttagctggagaagagaccactgcg
gaagtaaaaggagcgcctcgaaacctaaaggtaacagacgaaactacagacagcttcaaa
attacctggactcaagctccagggagagtgttaaggtaccgaattatatataaaccagtt
gctggcggagagagcaaagaagtgaccacccctgccaatcagaggaggataacactcgag
aacctgactccagacacaaaatatgaagtagctgtaattccggaatatttctcaggacct
gggtctccgctgactggaaatgcagccactgaagaagttagagggaacccaagagactta
agagtttctgaccccacaacatcaactatgaaattgtcttggactagagcaccggggaaa
gtgaaacagtatctcatcacatacaccccagcggcagggggtgagactcaagaggttact
gtgacgggagacacagacagaactgtgctgagaggattaaacgaagggacacaatacgcc
ttatctgtgacagccttgtatgcatccggggctggagatgccctgtttggtgaaggagca
acgcttgaagaacgtggttcacctaaggatttagttactaaagatatcaccgacacatca
attggggcttattggacatctgctccaggaatggttcgaggttacagggtttcatggaaa
tcgctttatgacgatattgagactggagagaaaagtcttcccagagatgcaattcatact
gtgatagaaaatctgcagccagagaccaaatacaaagtttcagtatttgcagtttacagc
agtggagaaggagaacctttgaatggagaagccacgactgaattatccccagattcaaaa
accttgaaagtggatgaagaaacagaaaacacaatgagagttacctggaaagcagcacct
gggaaagtcatcaactaccgtgttgtgtatcgcccccgtgggggagggagacaaatggtt
gctaaagtgccacccacagtcacctcaacagtgttaaaacgacttcagccccagaccaca
tatgacattacagttctcccaatatacaagactggagaaggaaagcttaggcaaggatca
ggaacaacagcttctcggtttaaatcacccagaaacctcaaaacatctgacccaaccatg
tcaagcttccgagtgacttgggagcctgcccctggggaagtaaagggttataaagtcact
ttccaccctacgggggatgacagaagactgggggagttagtggttggaccatatgacaat
acagttgttttggaggaacttagggcaggtaccacgtataaagtaaatgtttttggaatg
ttcgatggaggagagagttcaccccttgttggacaagaaatgacaaccctttctgataca
actgtcatgccaattttatcctctggaatggagtgtctcaccagagcggaagcagatatt
gtgttgctggtggatggatcatggagcattggccgggcaaattttagaaccgtgaggagt
ttcatttctcgcattgtggaagtctttgaaattggtcccaaaagagtacaaattgccctt
gctcagtacagtggggatcccagaacagagtggcagttaaatgctcacagagacaagaag
agcttgttgcaagccgtggcaaacttaccatacaaaggaggcaatactctcacaggcatg
gctttgaatttcattcgtcaacagagcttcaagacccaagctggcatgaggcctcgagct
cgaaaaattggtgttctcatcactgacggaaaatcacaagatgatgttgaggcaccttca
aagaaactcaaggatgaaggcgtggagttgtttgctattggtattaaaaatgctgatgaa
gatgagttaaagatgattgcgacggatcctgatgatattcatgcatacaacgtggctgat
tttgagtcactctctaggattgtagatgacctcaccattaacttgtgtaacagtgtcaaa
ggtccaggtgacctggaagcaccttctaacctagttatttctgagcgaacccatcgttct
cttagagtgagctggacacctcctgctgacagcgtggacaggtataaggtggaatactat
cccgtttctggagggaaacgtcaagaattttatgtgagccggctggaaagtagcacagta
ctgaaagatctgaagcctgaaacggagtatgttgttaatgtgtattctgtggtagaagat
gaatatagtgagcctctgaagggcacagaaaaaactttaccagtccccgtggtcagcatg
aatatttatgatattagccctaccagcatgcatgtgcagtggcagccagtgggaggggct
actggctacaccgtgacatatgaacccaccaatgccacagaaccagcaaaaccgaaagag
atgcgtgtggggccaacagtgaacgacgtgcagctgactgatctttttcccaacactgag
tatgcagtcacagtgcaggctgccttgcacgacctcactagtgaacctgtcactgctcgg
gaagtcaccttgcctttacccaaacctcgagatctgagactcagagatgtgactcacagc
accatgaatgtgttttgggaacccgtgcctggaaaagtgcgtaaatatatcgttcgctac
aaaacaccagaagaggatgtcaaagaggtagaagtagacaggtcaaggaccagcacccct
ctcaaagacctgctctcacaaaccctgtacacagtaggggtttctgcagtatatgatgaa
ggggagtctnccccggtgactgctcaagaaactacccgtactgtgccagcaccaacaaac
ctaaagattactgaagtaacaccggagagtttcagagggacttgggatcatggagcttca
gatgtgtccctgtacagaataacctgggcaccttttggaagctcagataagatggagacc
atcttaaatggagatgaaaatactttggtgtttgaaaacctgaacccgaacactctttat
gaagtttctgttactgccatatatcctgatgagtcagaaagcgatgacctgactggcagt
gagcgcacaccacgtttgatacccttaacaacacaagctccaaaaagtggcccacgaaac
cttcaagtgtacaatgcaacatctaacagcttgactgttaagtgggatcccgctagtggt
cgtgtgcagaaatacagaattacttaccagccttcaacaggagaaggcaatgagcaaacg
accacaatagggggacggcagaacagtgtggtcctgcagaaactgaagcctgacactcct
tacacgatcactgtgtcctccctgtatcctgacggtgaaggaggtcggatgacaggaaga
ggcaagaccaaacctctgaatactgtgaggaacctcagagtgtatgacccttctaccagc
accttgaatgttcgctgggaccacgcagagggaaaccctcgtcagtacaagctcttctac
gcaccaacagcaggtggtccagaggaactggtaccaatccctgggaatacaaattatgcc
attcttaggaatctgcagccagataccccatatactgttacagtagttcctgtttatgct
gaaggagatggaggacgcacatcagataccggaaggacattggtgagagggctggcaagg
aatgtccaagtgtacaatcccacgccaaacagcctagacgtccgctgggaccctgcgccg
gggcccgtgcagcagtatcgcatcgtgtattctcctgtggctggcacaagaccgtcggag
tctatggtggtgccagggaatacccgcacggtgcacctggagcggctgattccggacaca
ccctattctgtgaacattgtagctctctactccgatggagagggaaaccccagccctggc
cagggccgaacgctaccacgaagtggaccaagaaatatgagagtctttggggagacaacc
aatagcctctctgtagcctgggatcatgctgatgggccggttcagcaatacaggatcatt
tattctcccactgttggagatccaattgatgaatataccacagtcccaggcagaagaaat
aatgtaatgttgcagcccctgcagtctgatactccatataaaattactgttattgctgtt
tatgaagatggagacggtggccatctaacaggaaatggaagaactgtgggactgcttcca
cctcaaaacatacacatctctgatgaatggtatacgagattcagagtatcctgggaccct
tcaccctctccggttcttggatataaaattgtgtataagccagtgggttccaatgagccc
atggaagtttttgttggagaaatgacatcatacacgttacacaatctcaatcccagcacc
acctatgatgtggatgtttatgctcagtatgattctggactcagtgtccccctgacggat
caaggcactacattgtatttaaatgtgacagatctgaaaacttaccaggtcgggtgggat
acgttctgtgttagatggtcacctcaccgggcagccacctcctacaggctaaaactaagc
cctgcagatggaaccagaggacaagaaattacagtgcgtggatcggaaaccagtcactgc
ttcactggtctttcaccagaaactgattatggtgtcactgtttttgtgcagacaccaaat
cttgagggacctggagtctctgtcaaagaacataccactgtgaagccaacagaagcccct
acggagcctcccacacctcctccccctcccacaattccaccagcccgggaagtatgcaaa
ggggccaaggcagatattgtattcttgactgatgcctcctggagtatcggggatgataat
tttaacaaagttgtaaaattcatcttcaatactgtgggagcctttgatgaaatcagtcct
gctggaattcaggtctcatttgtgcagtacagtgacgaggtcaagtctgagttcaagttg
aacacgtacaatgacaaggcccaagcccttggggccctccagaatattaggtacagagga
ggaaacacaagaacaggcaaagctctcacgtttatcaaggagaaggtcttgacctgggag
agcggcatgaggaagaatgtccccaaggtgctggttgtggtcacagatggtcggtcacag
gatgaggtcaagaaggcagctttggtcatccagcagtcggggttcagtgtctttgtagtc
ggtgtggctgacgttgactacaatgagctcgctaacattgccagcaaaccgagtgaacgg
cacgtgttcattgtggatgactttgaatcttttgagaagattgaggacaaccttatcacg
tttgtctgtgagactgccacttcaagttgtcctctcatttatttggacggctacacctca
cccggttttaagatgcttgaagcatacaacctgacagaaaagaattttgcttccgtacca
ggagtctctttggagtctgggtctttccccagctactcagcatacaaacttcagaagaat
gcatttgtgaatcagcctacagcagatctacacccaaatggacttccttcttcatataca
attatattattgttccgacttctcccagaaactcccagtgacccttttgcaatttggcaa
atcacagatagagactataaaccacaagttggagtaattgcagatccttctagcaagaca
ttatcattctttaacaaggatacaagaggtgaagtgcaaactgttacatttgacacagat
gaagtgaagacattattttatggcagttttcacaaggttcatattgtagtgacctcaaaa
agtgttaagatttacatcgactgctatgaaattatagaaaaagacatcaaggaagctgga
aatatcacaactgatggttatgaaattcttggaaaacttcttaaaggggagaggaaatca
gctacattccaaatccagagttttgatattgtatgcagtccggtgtggaccagtagagac
agatgctgtgatattccctctaggagagatgaagcaaaatgccctgctcttcccaatgct
tgtacgtgtacacaggacagtgttggacctccaggtccaccaggccctgcgggaggacct
ggtgctaaaggtcccagaggtgaaagaggtatcagtggggcagttgggccccctggccct
cgtggagatacaggtcctccaggcccccagggtcccccaggcccccagggacccaacgga
ctctccattccgggagaacaaggtcgccaagggatgaaaggtgatgctggagagccagga
cttcccggccggaccggaaccccaggattacctggcccaccgggaccaatgggacctcca
ggagatagaggctttactggaaaagatggtgcaatgggacccaggggaccccctgggcca
ccgggaagcccaggctctccaggagtcacaggacctagtgggaaaccaggaaaacctgga
gaccatggcagaccaggtccatctggattgaaaggagagaagggcgatagaggagacatt
gcttcccagaacatgatgcgagcagttgcaagacaagtctgtgaacaattgataagtggt
cagatgagcagattcaatcagatgctgaatcagattccaaatgattatcactccaatcgc
aaccaaccaggcccaccgggtcccccaggccctcctggcagtgcgggagccagaggagaa
ccgggacctggggggcgaccaggcttccctggcacaccagggatgcaggggcccccgggt
gaacgaggtttgccgggagagaagggtgaaaggggtattggatctccgggacctcgaggg
ctgcctggccccccaggtccacaaggagaatccagaacgggtccaccagggtccacaggt
tcaagaggtcctcctggccccccaggtcgtcctggaaactcaggtatccgaggcccccca
ggtcctcctggatactgtgattcatcccagtgtgccagcatcccatacaatgggcaaggc
tatccaggttccggctaa
DBGET
integrated database retrieval system
