Entry |
|
Symbol |
PUM1
|
Name |
(RefSeq) pumilio homolog 1 isoform X4
|
KO |
K17943 | pumilio RNA-binding family |
|
Organism |
fca Felis catus (domestic cat)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:fca00001]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101093375 (PUM1)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
C1:complement(23315042..23447977)
|
AA seq |
1225 aa
MPLPPPEPGPEPIPGCTAPAPSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKH
HPQEAANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYF
FQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGE
QLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQSFHVNSEV
NSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDADSDENDKGEKKNKGTFDGD
KLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSANEVDLLGPNQNGSEGLAQ
LTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQ
QQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGLAPAAFVPNPYIISAAPPGTDPYTA
GLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTPQAQQGQQQV
LRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTG
ALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPL
GTQQPQPQPQQQPSNSLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGA
TLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLSFSSSPGP
VGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASS
LFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGS
RFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRG
HVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECV
QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQY
GNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV
CTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHIL
AKLEKYYMKNGVDLGPICGPPNGII |
NT seq |
3678 nt +upstreamnt +downstreamnt
atgccgctgccaccgccggagccggggccagagcctatcccaggatgcaccgcgccagcc
ccgtccccagtgggccgccatgttgtcggagtgaaaggtgttggtggaatgagcgttgca
tgtgtcttgaagagaaaggcagtgctttggcaggactctttcagcccccacctgaaacat
caccctcaagaagcagctaatcccaacatgcctgttgttttgacatctggaacagggtcg
caggcgcagccacaaccagctgcaaatcaggctcttgcagctgggacacactccagccct
gtcccaggatccataggagttgcaggccgttcccaagacgacgctatggtggactacttc
tttcagaggcagcatggtgagcagcttgggggaggaggaagtggtggaggcggctataat
aatagcaaacatcgatggcctactggggataacattcatgcagaacatcaggtgcgttct
atggatgaactgaatcatgattttcaagcacttgctctggagggaagagcgatgggagag
cagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaagatggaccaaaa
ggaatattcctgggtgatcaatggcgagacagtgcctggggaacatcagatcattcagtt
tcccagccaatcatggtgcagagaagacctggtcagagtttccatgtgaacagtgaggtc
aattctgtactgtccccacggtcggagagtgggggactaggcgttagcatggtggagtat
gtgttgagctcatccccgggcgattcctgtctaagaaaaggaggatttggcccaagggat
gcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacctttgatggagat
aagctaggagatttgaaggaggagggtgatgtgatggacaagaccaatggtttaccagtg
cagaatgggattgacgcagacgtcaaagattttagccgtacccctggtaattgccagaac
tctgctaatgaagtggatcttctgggtccaaaccagaatggttctgagggcttagcccag
ctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatggagtcccagagt
gtccctttggaccccatggaacatgtgggcatggagcctctgcagtttgattattcaggc
acgcaggtacctgtggactcagcagcagcaactgtgggactttttgactacaattctcaa
caacagctgttccaaagacctaatgcgctcgccgtccagcagttgacggccgcgcagcag
cagcagtacgcactggcggcggctcaccagcctcacatcgcaggtttagcgcccgctgcg
tttgtccccaatccctacatcatcagcgctgctcccccggggacggacccctacacggct
ggactggctgcagcggcgacactaggcccggctgtggtccctcaccagtattatggagtc
actccctggggagtctaccctgccagtcttttccagcagcaagcggctgccgccgcggca
gcaaccaattctgcaaatcagcagactaccccacaggctcagcaaggacagcagcaggtt
ctccgtggaggagccagccagcgtcctttgaccccaaatcagaaccagcagggacagcaa
acagatccactagtggcagctgcagcagtgaattctgcccttgcttttggacaaggactg
gctgcaggcatgccaggttatccggtcttggctcctgctgcttactatgaccaaacgggt
gccctcgtggtgaatgcaggggcgagaaacggtctcggggctcctgtgcggctggtcgct
cccgccccagtcatcatcagttcctcagccgctcaagcagctgttgcagcggccgcagct
tcagcaaatggagcagccggtggtcttgctggaacaacaaatggaccgtttcgcccttta
ggaacccagcagccccagccccagccccagcagcagcccagtaacagcctggcatccagc
tctttctatggcaacaactctctgagcagcaactcacagagcagctccctcttctcccag
ggctcagcccagcctgccaacacgtccttgggatttggaagtagcagttctctcggcgcc
accctgggatcagcccttggagggtttggaaccgcagttgcaaactccaacactggcagt
ggctcccgccgtgactccctgactggcagcagtgacctttataagaggacatcgagcagc
ttgacccccattggacacagtttttataacggccttagcttttcctcctctcctggaccc
gtgggcatgcctctccctagtcagggaccaggacattcacagacaccacctccttccctc
tcttcacatggatcctcttcaagcttaaacctgggaggactcacaaatggcagtggaaga
tacatctctgctgctccaggcgctgaagccaagtaccgcagcgcgagcagtgcctccagt
ctcttcagccccagcagcaccctgttttcttcctcccggttgcgatatggaatgtctgat
gtcatgccctctggcaggagcaggcttctggaagattttcgaaataaccggtaccccaat
ttacaactgcgggagattgccgggcatataatggagttttcccaagaccagcatgggtcc
agattcattcagctaaaactagagcgagccacaccagctgaacgccagcttgtcttcaat
gaaatcctccaggccgcttaccagctaatggtggatgtgttcggaaattacgtcattcag
aagttctttgaatttggcagccttgaacagaagctggcgttggcagaacgcattcgaggc
cacgtcctgtcattggcactgcagatgtatggctgccgtgttatccagaaagctcttgaa
tttattccctcagaccagcaggtaattaacgagatggttcgggagctagacggccacgtc
ctgaagtgtgtgaaagaccagaatggtaatcacgtggttcagaaatgcattgaatgcgtg
cagccccagtctttgcagttcatcatcgatgcgtttaaggggcaggtatttgctttgtcc
acgcatccttacggctgccgagtgattcagaggatcctggagcactgtctccctgaccag
actctccccattttagaggagcttcaccagcacacagagcagcttgtacaggatcagtat
ggaaactatgtaatccagcatgtattggagcatggtcgtcctgaggataaaagtaaaatt
gtagcagaaatccgaggcaatgtacttgtattgagtcagcacaaattcgcaagcaatgtt
gtggagaagtgcgtcactcatgcgtcccgtacggagcgtgctgtgcttatcgatgaggta
tgcaccatgaatgacggtccccacagtgccttatacaccatgatgaaggaccagtatgcc
aactatgtggtccagaagatgatcgatgtggcagagccagcacagcggaagatcgtcatg
cataagatccggccccacatcgccactctccgcaagtacacctacggcaagcacatcttg
gccaagctggagaagtactacatgaagaatggcgttgacttagggcccatctgtggcccc
ccgaatggtatcatctga |