Felis catus (domestic cat): 101095427
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Entry
101095427 CDS
T02385
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
fca
Felis catus (domestic cat)
Pathway
fca03015
mRNA surveillance pathway
fca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101095427 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
101095427 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fca03019
]
101095427 (PABPC4)
03041 Spliceosome [BR:
fca03041
]
101095427 (PABPC4)
Messenger RNA biogenesis [BR:
fca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101095427 (PABPC4)
mRNA cycle factors
Stress granule specific factors
101095427 (PABPC4)
Spliceosome [BR:
fca03041
]
Complex C
Other components
Complex C specific factors
101095427 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
101095427
NCBI-ProteinID:
XP_003989935
UniProt:
A0ABI8AH50
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All DBs
Position
C1:complement(30607187..30622618)
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AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQTLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgagaa
gccgagcttggagccaaagccaaggagttcaccaatgtttatatcaaaaactttggggaa
gaggtggatgatgagagcctgaaagagctgtttagtcagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgcgcacagaagaaagtggaacggcaggccgagttaaagcggaaattt
gaacagctgaagcaagagagaattagtcggtatcagggagtgaatctctacattaagaac
ttggatgacaccattgatgatgagaagttaagaaaagagttttctccttttggatcaatc
accagcgctaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcggtcactgagatgaatggacgcatcgtgggctcc
aagccgctgtacgtcgccctggcccagagaaaggaagagagaaaggctcacctgaccaac
cagtatatgcagcgggtggctggaatgagagcacttcctgccaatgccatcttaaatcag
ttccagcctgcagctggtggctactttgtgccagcagttccacaggctcagggaagacct
ccgtattacacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
gctcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
accttagcacctcgtgctgctgttgctgctgctgctcctcgggctgtcgcaccttataaa
tacgcttccagtgtccgcagccctcaccctgccatccagcctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagcccttgaccgcctccatgttggctgcagcacccccc
caggaacagaagcagatgttgggagaacgtttgttcccactcatccaaaccatgcattca
aacctggctggaaaaatcacaggaatgctgctggagattgacaactctgagctgctgcac
atgctggagtcccctgagtctctccgctccaaggtggatgaagctgtggcggttctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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