Felis catus (domestic cat): 101095996
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Entry
101095996 CDS
T02385
Symbol
COL16A1
Name
(RefSeq) collagen alpha-1(XVI) chain isoform X1
KO
K24339
collagen type XVI alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101095996 (COL16A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101095996
NCBI-ProteinID:
XP_006934586
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Position
C1:complement(23885627..23935767)
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AA seq
1622 aa
AA seq
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MWAPWVSGLWLLSLWAACSHGADTGEQCPPSHQEGLRLEHRSHVSTNVTGFNLIRRLNLM
KTSAIKKIRNPKGPLILRLGAAPLTQPMRRVFPRGLPDEFALVLTLLLKKHTRQNTWYLF
QVTDGDGYPQISLEVNSQERSLELRARGQDGDFVSCIFPVPQLFDLRWHKLVLSVAGRVA
SVHVDCTSASSRPLGPRRPMRPVGHVFLGLDAEQGKPVSFDLQQAHIYCDPELVLEEGCC
EILPGGCPPETSKARRDTQSNELIEINPQTEGKVYTRCFCLEEPQNSKVDAQLTGSISQK
AERGTKARQETAADECPPCVHGTRESNVTTGPSGPKGGRGERGLPGPSGPKGEKGARGSD
CVRISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGQKGQKGEKGDGGVKGSPGKPGRDG
RPGEICVMGPKGQKGDPGFVGPEGLAGEPGPPGLPGAPGIGLPGTPGDPGGPPGPKGDKG
SAGVPGKEGPGGKPGKPGVPGLKGEKGDPCEVCPTLPEGFQSFVGLPGKPGPKGEPGDPA
PAKEGLRSAGWKGDRGDPGIQGPKGEKGDSCLSCSLAVGAQHLGPSTGTKGDMGLPGFGL
PGLPGKVGAPGPTGLKGEKGNFGEAGPAGRPGPPGPVGSTGIKGEKGEPCEPCPALSETQ
DGDSYAVALPGPPGEKGEPGPPGLGLPGKQGKAGERGPKGNKGDAGNPGDPGVPGTTGRP
GLSGEPGVRGPMGPKGEKGDGCTACPSLQGAVPSTAALPGKPGPKGEPGPEGVGRPGKPG
QPGLPGVQGPPGLKGTQGEPGPPGRGIQGPQGEPGVRGLPGIQGLPGPRGPPGPTGEKGA
KGSPGLKGGAGPMGPPGASVSGPPGPDGQQGLPGARGIPGEKGPQGEKGEPGECSCPSRG
DPIFSGMPGAPGLWMGSSWQPGPQGPPGVPGPPGPPGMPGLQGVPGNTGLPGQPGLTAEL
GSLPIEQHLLKSLCGDCVQGRTAHPVALLEKGEKGDQGIPGVPGLDSCARCFTERERPRA
EEARGDNGEGDPGCAGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSP
GLPGLQGERGLRGLTGEKGEPGPPGQPGYPGAMGPPGLPGIKGERGYVGPPGEKGESGPP
GSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKAGAPGPPGPQ
AEKGSEGIRGPPGMPGPPGPPGSPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPP
GFKGKTGHPGLPGPKGDCGKPGPPGSSGRPGAEGEPGAMGPQGRPGPPGHIGPPGPPGQP
GPAGISAVGLKGDRGAPGERGMLGLPGQPGTPGHPGPPGEPGADGAAGKEGPPGKQGLYG
PPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGSPGPAGSPG
LPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDG
APGRPGAPGSPGLPGQIGREGRQGVPGMRGLPGTKGEKGDIGIGMAGENGLPGPPGPQGP
PGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKNMKGP
FG
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaccttgggtttctggcttgtggctgctcagtctctgggccgcctgcagccat
ggggcagatacaggtgagcaatgcccaccttcacaccaggaaggactcaggttagaacac
agaagccatgtatccaccaacgtgactggctttaatctcatccgccgactcaacctcatg
aaaacatctgccatcaagaagatccgcaaccccaaggggcccctcatcctgcgactgggg
gcagcccccctcacccagcccatgcgacgagtattccctcggggcctccctgatgagttt
gccctggtgctgacactattgctgaagaaacacacccgccagaacacgtggtatttgttt
caagtgaccgatggagacgggtacccacagatttccctggaagtcaacagccaagagcgg
agcctggagctccgggcccgcggccaagatggtgactttgtgtcctgcatcttcccggtg
ccccagctctttgacctgcgctggcacaagctggtgctgagtgtggctggacgcgtggcc
tccgtgcatgtggactgcacgtcagcctcctctcggcctctggggccccggcgacccatg
cggcctgtgggccatgtctttctgggcttggatgccgagcaggggaaacccgtttcgttt
gaccttcagcaggcacacatctactgcgacccagagcttgtgctggaggagggatgctgt
gagattttacccggagggtgtcccccagagacctccaaggcccgccgggatacccagagc
aatgagctcattgagatcaatccacagaccgaaggcaaggtctacactcgctgcttctgc
ctggaggagcctcaaaacagcaaggtggatgcccagctgacaggaagcatcagccagaag
gcagaaaggggaaccaaggcccgtcaggagacagcggccgatgagtgcccaccctgtgtc
catggtacccgggagagcaatgtcacaactggtccttctggacccaagggagggagaggt
gagcgaggccttcctggcccatcaggccccaagggagagaagggagcccggggcagtgac
tgtgtccggatctccccggatgccccgcttcagtgtgcagaaggcccgaagggagagaag
ggagagtcaggagccttgggaccctcaggacttccgggctctacaggccagaagggccag
aaaggcgagaagggagacggaggcgttaagggctcgccgggaaagccaggccgagacggc
cggcccggggagatctgcgtcatgggacccaaagggcagaagggagaccctggctttgtt
gggcctgagggactggcaggagagcctgggccccctggcctccctggggcccctgggata
ggacttcctgggaccccgggggacccgggtggcccgccaggccctaagggagacaagggc
agtgcgggggtgccaggaaaggaaggtcccggtgggaaacctgggaagccaggggtgccg
gggctgaagggagagaagggtgacccctgtgaagtgtgcccaacgctgcctgaagggttc
cagagtttcgtagggctccctggaaaaccagggcccaagggggaaccaggtgatcctgca
ccagccaaggagggcctgagatctgctggatggaaaggtgataggggagaccctggcatc
caaggtcccaaaggagagaagggggactcctgcttgtcctgcagcttagcggtaggggcc
cagcatcttgggccctctacagggaccaaaggagacatgggcctccctggcttcggtttg
cccggccttccggggaaagttggggctccagggccaacagggctgaaaggagagaagggt
aattttggggaggcagggccagctggccggccgggtccaccagggccagtgggatccaca
ggcatcaaaggggagaagggggagccttgtgagccatgcccagccctgtccgagactcag
gatggggacagctacgcggtggccttgcctggccctcctggagagaagggagagcctggg
cccccgggccttggcttgccagggaaacagggcaaggctggagagcgtggaccgaagggg
aacaagggtgatgctgggaaccctggagatcctggagtgccaggcaccacggggcggccg
ggactgtcgggagagcctggcgtgcggggccccatgggcccgaaaggagaaaagggtgat
ggctgcactgcctgccccagcctgcagggggcggtgccgagcacggcagcactgcctggg
aagccgggccccaaaggagagccgggcccagaaggtgtgggccggcctgggaaaccgggc
cagcccggtctacctggagttcaagggcccccaggactgaagggcacccagggagagcct
ggacctccgggaaggggaatccaggggccgcagggggaacctggagtccggggtttgcct
ggcattcaggggcttccgggacctcggggaccacctggccccaccggagagaaaggtgcc
aaggggtctccggggctgaaaggaggtgccgggccgatggggccccctggtgccagtgtc
tctgggcctccgggccccgatgggcagcaaggacttccaggagccagagggattccaggt
gaaaagggacctcagggagagaagggcgagccaggggagtgctcctgcccttctcgaggg
gaccccatcttctctggcatgccgggtgctccgggactttggatgggcagctcctggcag
ccgggcccgcagggtcccccaggtgttcctggaccccctggaccccctggaatgccgggg
ctgcagggagtgcctggaaacaccggtttgcccggacagcctgggctaacggcggaactg
ggatccttaccaattgaacagcacctccttaagagcctctgcggggactgtgtccagggg
cggacggcccacccggtggcgctcctggaaaaaggggagaagggggaccagggcattccc
ggcgtgccaggcctggacagctgtgcccggtgcttcacagagcgggagcgccccagagcc
gaggaggcccggggagacaacggcgagggggatcctggctgtgctggaagtcctggcctg
cccggtcctccaggactgcccggccagagaggagaagagggtccgcctggcatgaggggc
tccccgggtcctccaggccctattggccccccaggttttcctggtgctgttggctccccc
ggattgcctggtcttcaaggagagcgaggcctcaggggcctgacaggagagaagggggaa
ccgggtcctccagggcagcctggttacccaggtgccatgggccccccaggactgcctggc
atcaagggggagcggggctacgtcgggcccccgggagagaaaggggaatcgggcccacca
ggatctgaaggcctcccaggtcccccaggcccagcaggtccccgaggagagcgaggaccc
caagggaactcgggagagaagggtgaccagggatttcaaggccagccaggctttcccggc
ccaccgggtcctcctggattcccgggcaaagctggagcacctggcccccctggcccacaa
gcggagaagggcagtgaaggcatccgaggcccaccaggcatgcctggtccccctgggcca
ccaggatcgcctgggatccagggccctgccggcctggatggtctggatgggaaggacggc
aagcctggcttgaggggggaccctggccccgctggccctcctggactcatgggacccccg
ggcttcaagggaaaaacgggacaccctggcctcccgggaccgaagggtgactgtgggaaa
ccagggcccccaggcagcagtggccggccaggagcagagggtgagcctggtgccatggga
cctcagggaagacccggcccccctggccatattgggccaccgggacctccaggccagccg
ggcccagctgggatctctgcagtgggcctaaaaggagaccggggagcccctggagaaagg
ggcatgctaggccttccaggccagcctgggacccccggacaccctggccccccgggcgag
cctggtgcggacggtgcagctggcaaagagggaccccctggaaaacagggactttatgga
ccccccggtccaaagggtgatccgggaccttcaggacagaagggccaggcaggagagaag
ggaagagctggcatgcctggtgggcccggcaagagtggctccatggggcccgttgggcca
ccgggtcctgcaggagagagaggccaccctggatctccggggcctgcggggagccctgga
ttgcccggggtgcctggctctatgggagacatggtgaattatgatgaaatcaagaggttc
atcagacaagagatcattaaaatgtttgatgagaggatggcttattacacctccaggatg
cagttccccatggagatggccgcagctccgggacgaccaggacccccaggaaaggatggg
gctccgggccggccaggcgctccgggatcaccaggacttcctggtcagatcggcagagaa
ggacgccagggtgtgccaggaatgagaggattgcctggtaccaaaggtgaaaagggggac
attggtattggcatggctggcgaaaatggtctccccggccccccaggtcctcaaggccct
ccagggtatggtaagatgggcgcgaccggacccatgggccagcaaggcattccgggcatc
cctggccctccgggtcccatgggccagccaggcaaggctggccactgtaacccctccgac
tgctttggggccatgccgatggagcagcagtacccgcccatgaaaaacatgaaggggcct
ttcggctga
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