Felis catus (domestic cat): 101096803
Help
Entry
101096803 CDS
T02385
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X2
KO
K25392
girdin
Organism
fca
Felis catus (domestic cat)
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fca03037
]
101096803 (CCDC88A)
Cilium and associated proteins [BR:
fca03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101096803 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
T4SS_LegC2C7
Motif
Other DBs
NCBI-GeneID:
101096803
NCBI-ProteinID:
XP_011279314
LinkDB
All DBs
Position
A3:complement(73929196..74072286)
Genome browser
AA seq
1873 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEEIEPLLKNMALHLKRLIDERDEHSETIVELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
STMDSAEGNTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEISIFKESCIRLKELEKENKELVKRATID
VKTLVTLREDLVCEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPTSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
AVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLIAKHGTLKSAHKNLEVEHKDLED
RYNQLLKRKGQLEDLEKTLKVEQEKMLLENKNHETIAAEYKKLCGENDRLNHTYNQLVKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDT
TSFEDISPQGISDDSSTGSRVHASRPASLDSSRTSTSNSNNNASLHEVKGAVNIQSRPQS
HSSGEFSLLHDHEAWSSSGSSPIQYLKRQTRSSPMLQHKMPETLESRAHHKIKTGSPGSE
VVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGKT
PGDFYDRRTSKPEQFMRPSPRKTEDASFISSPGKPTLGTQGKIKLVKETSLSRQSKDSNP
YATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPISVDSPPATADSNITAASHVDKVQES
RNSKSRSREQQSS
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatttttactcccctcctggagcagtttatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg
gctttggttgatggggtattcttgaaccaggtcatgctccaaatcaatcctaaatcggag
agtcagagagtaaataaaaaggtcaacaatgatgcatcacttagaattcataatctatcc
attttggtgagacagataaaattttattaccaggagactttgcagcaattgatcatgatg
tcattgccaaatgtcttaatcattggcaaaaatcctttttctgaacaaggcacagaagaa
gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctgcaatggatggaagtgactgat
atgtctcaggaggaaatagagccactcttgaaaaatatggcattacatctaaaaagactt
atagatgaaagagatgaacattcagagactatcgtagaactctctgaagaacgggatggt
cttcattttttaccccatgcctcttcatctgcacagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacaacatctgtcagtggaactggcagatgctaaggcaaagata
agaaggcttaggcaggaattggaggaaaagactgaacagttgttggactgtaaacaagaa
cttgagcaaatggaaatagaactaaaaaggctgcaacaagagaacatgaatttgctttcg
gatgctcgttccgctagaatgtaccgagatgaattagatgcacttcgggagaaggcaatc
agagtggataagcttgaaagtgaagtcagcagatacaaagaaagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagataatcaggttttattagaaacaaaa
accatgttggaagatcaattagaaggaactagagctcgttctgataaattacatgaatta
gaaaaagagaatttacaactgaaagctaaactgcatgatatggaaatggaacgtgatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagctggaacaaatatctagaactagc
gaactctctgaagcaccacaaaaatccttgggccatgaagtgaatgaattaacatcaagt
agattattgaagttggagatggaaaaccagagtctgacaaaaactgtggaagaacttcgg
agtactatggattctgccgaaggcaacacttccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaaaaaggttgaaattcttgaaaacgagattattcaagaaaagcaaagt
cttcagaattgtcagaatttaagcaaggatctaatgaaggagaaggctcaacttgaaaaa
acaattgaaacacttagagaaaattcagaaagacagattaaaatattggaacaggaaaat
gaacatctgaatcaaaccgtgtcttctttaaggcagcgatcccagataagtgctgaagca
agggtgaaagacattgaaaaagaaaataaaattctccatgaatctatcaaagaaacaagt
agcaagttaagtaagattgaatttgaaaaaagacaaattaggaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaatgagttgcatcatcttgagaaagaa
aatgaattgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaatagaaaattaaaaaaaacattagat
agttttaaaaaccttacttttcagttagaatccctagaaaaagagaattcccaactagat
gaggaaaacttagaactgcgaaggaatgtggaatctttgaagtgtgcaagcatgaaaatg
gctcagctacagctagaaaataaagaactggaaagtgaaaaagagcagcttaagaagggt
ttagaactcatgaaagcatctttcaagaaaacagaacgcttagaagttagctaccagggt
ttagatacagaaaatcagaggctacagaaagctctagaaaatagcaataaaaaaattcaa
cagttagagagtgaactacaagacttagagatggaaaatcaaacattgcagaaaaaccta
gaagagttaaaaatatccagcaaaagactagaacaactagaaaaagaaaataaatcatta
gagcaagagacttctcaactggaaaaagataagaagcaactggagaaagaaaataaaaga
ctccgacagcaagcagaaataaaagataccacattggaagaaaataatgtgaaaattggg
aatttggaaaaagaaaacaaaacccttttcaaagagatcagtatttttaaagaatcctgc
attcgtctgaaagaattagagaaagaaaataaggagcttgtgaaaagagccactattgat
gtaaaaactttggttacattacgagaggatttggtgtgtgaaaaattgaagactcaacaa
atgaataatgatcttgaaaaattaactcatgagcttgaaaagatagggctaaataaagag
cgactcttgcatgatgagcagagtactgatgacagtaggtacaaacttttggaatcaaaa
ttagaatcgactctaaagaagtctcttgaaattaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacaaattacaaccagcagttgcgccaagaacttaaaacagtg
aaaaagaactatgaagctctcaaacagagacaagatgaagaaaggatggtacagagctct
cctccaacttctggtgaagataataaatgggagcgagaaagtcaagaaacgactagagag
cttctgaaggttaaagacagattaattgaagtagaaagaaataatgctacattgcaagca
gagaagcaagcactgaaaactcaactgaagcaacttgagacacagaacaataatttgcag
gctcagattcttgcacttcagaggcagacagtgtccttacaggagcagaatactactctt
caaacgcagaatgcgaagcttcaggttgaaaattctacccttaattcccaaagtacttca
ctgatgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaa
gctgtaatcaaagagcgagaagacctgaaatctctctatgattctctgatcaaagatcat
gaaaagctggaacttcttcatgaacggcaggcttcggagtatgagtctctcatcgctaaa
catggaactctaaagtctgcccacaaaaatcttgaagtagaacataaagaccttgaagat
cgttacaatcagttactaaaacggaaaggacaattggaagatttggaaaaaacactgaaa
gtagaacaggaaaaaatgctgcttgaaaacaaaaaccatgagactatagctgcagaatat
aagaaactttgtggtgaaaatgataggttgaatcatacatataatcagcttgtaaaagaa
actgaagttttacaaactgaccataaaaacttgaaaagtcttctaaataattccaaactg
gaacaaaccagattagaagctgaattttcaaagttaaaggaacaataccaacagttggac
atcacatccaccaagctcaataaccagtgtgagttgctaagccaacttaaaggaaattta
gaagaagaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaaca
ctattggagcaaaatatggaaagcaaagatctctttcatgttgaacaaagacaatacatc
gataagttaaatgaattaagacgacaaaaggagaaattagaagagaaaataatggatcaa
tacaaattttatgacccatctccccctagaaggagaggcaactggattactctaaaaatg
agaaaattgataaaatctaagaaagatattaatcgggaacgtcagaagtctcttacatta
acacctacccgctcagactccagtgaaggatttcttcaactcccccatcaagatagtcaa
gatagttcttcagtaggctcaaattctttagaagatggccaaactttggggaccaagaaa
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttca
acgggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttt
tcaactgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatact
acatcctttgaagacataagtccacaaggtattagtgatgattctagtacgggatcaaga
gttcatgcttcaagaccagccagccttgatagtagcagaacatccactagcaatagtaat
aataatgcttcactccatgaagtcaaaggtgcagttaatatccaaagcaggccacaaagc
cacagcagtggagaatttagcctgcttcatgatcatgaagcttggtccagcagtggtagc
agtccaatccaatacttgaaaagacagaccagatcaagtccaatgctccagcacaaaatg
cctgaaacgttagagagtcgagcacatcacaagatcaaaactggttctcctggaagtgaa
gttgttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagataaag
tcctcaagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtctcttctgac
tttttgggaaaaaacaaaccagttagctgtggtctggccaggtcagtaagtggaaaaacc
ccaggagacttctacgatagacggacaagtaagcctgaacaatttatgagacccagtcct
cgaaagactgaagatgcctccttcattagctctccaggaaaacctaccttaggcactcaa
ggaaagataaaattagtgaaagaaacttctctgtcacgacaatcaaaagatagtaatcct
tatgccactttacctcgtgcaagcagtgtgatctctactgctgaaggaactactcgaagg
acaagcatccatgattttctgaccaaggacagtagactacctatatcagttgattctcca
ccagctactgctgatagcaacatcactgcagcatctcatgtggacaaagtacaagaaagc
agaaattcaaaaagcaggtctagggagcaacaaagctcctaa
DBGET
integrated database retrieval system