Felis catus (domestic cat): 101096868
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Entry
101096868 CDS
T02385
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
fca
Felis catus (domestic cat)
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fca03000
]
101096868 (RC3H1)
04121 Ubiquitin system [BR:
fca04121
]
101096868 (RC3H1)
Transcription factors [BR:
fca03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101096868 (RC3H1)
Ubiquitin system [BR:
fca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101096868 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
101096868
NCBI-ProteinID:
XP_023103671
LinkDB
All DBs
Position
F1:complement(15938101..16026091)
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AA seq
1133 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE
GAVDLPNRKTPALPNGIVSAGNTVTQLIPRGTDPTYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP
VAPHPTQIRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPAFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKPMNISDYSPYGTHSGWGGSPYSPHQNIPSQGHFSERDRMSMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAGQSQPPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKGKLNTSKQAENGQPEPQSKVPAEDLT
LTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
ttcgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccccgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag
cagcagcccattactctgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaacttgtggaagaggaaggcaggattcgtgctatgagagcagctcgatct
ttaggtgaacgaacagttacagagctcattcttcaacaccaaaatcctcagcaactgtcc
tccaatctctgggcagcagtcagagctaggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagctggttctcttggccttggaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaggaagaatttagaacctatgaagctctgcgg
cgagaacacgactctcagatagtgcagattgccatggaagcaggcttacggattgcacca
gaccaatggtcctcattgctttatggagaccagtctcacaagtctcatatgcagtcaatc
attgacaagttgcagaccccagcgtcttttgcacaaagtgttcaggaactaacaattgct
ctccagcgaactggagatccagcaaacttgaaccgactaagaccccatttggagctactg
gcaaacattgaccctagtccagatgctcctcctcccacttgggaacagctagaaaatggg
ctggtggctgtgcgtacggtggtccatggtctggtagactatatccagaaccatagcaaa
aagggaacagaccaacagcagcctccacagcacagcaaatataaaacatacatgtgtcga
gatatgaagcagaggggaggatgcccgcgtggagccagctgtacatttgcacactcacag
gaggaactggagaagtttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccctcagcagctgtccttccagatgaa
ggtgcagtggatctgcctaacagaaaaacccccgctctgccaaatggaattgtatcagca
gggaatacggtaacacagctgattccacgagggacagaccccacctacgattctagtctg
aaaccaggaaagatagatcatctgagcagtagtgcccctggatcccctcctgacttgctg
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
gggccaacagacttgcctcccatgcctgtcaccaaaccccttcagatggtcccacggggt
tctcagttatatccagcgcaacaggcagatgtttattatcaggatcctcgaggagctgcc
ccaccatttgaaccagcaccttatcagcagggtatgtactacactccaccaccacagtgt
atgtcccgctttgtcagaccgccaccatctgctcctgaacctggtcctccctacttggat
cactatccaccctatctccaggatcgtgtagtaaactctcagtatggcacacagccacaa
cagtacccacctatgtacccgccacactatgatggccgccgagtgtaccctgctcagtcg
tacacaagagaggagattttccgagaaagtcctattcccattgagattccacctgcagca
gtgccatcctatgtgccagaatccagagaaagataccaacagatggagggttactatcca
gtggctccccatccaactcagatcagaccttcgtacatcagagagcctccttatagccgg
cttcctcctcctcctcagccccatcctagtctagatgagctacatcgcagacgaaaggaa
ataatggcccagctagaggaaaggaaggttatctctccacctccttttgcaccttcaccg
acattgcctcctgcctttcatcaagaggagtttctggacgaagacttgaaagtagctggg
aaatacaaaggaaatgattatagccagtattctccctggtcatgtgataccatcggctcc
tacattggcaccaaagatgcaaaacccaaagatgttgtggcagcggggagtgtggaaatg
atgaacgtggagagtaaaggaatgagagaccagcgactggatcttcaaagaagagcagca
gaaaccagtgatgatgaccttatccctttcggagaccgaccaaccgtttctcggtttggt
gccatctctcgaacctccaaaacaatatatcagggtgctggtccaatgcaggctatggca
cctcagggagctcccacaaaaccgatgaacatctcagattatagtccatatggaacccac
agtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggacagaatgtccatgtcagaagtagccagtcatggaaaaccccttccatct
gctgagcgggaacagctacgactagaattgcagcaactaaaccatcaaattagtcagcag
acccagctacgtggcttagaggctgttagtaacaggctggtgttgcagagggaggtgaac
actctggcaggccagtcccagccaccaccaccaccacctccaaaatggcctggaatgatt
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggagatcgggaagagaacc
cgggaactgagtatggagaaccagtgttctctggacatgaaaggcaaattgaatacaagt
aagcaagcagaaaatggacaaccagaaccacaaagtaaggttccagctgaggaccttaca
ttgacattcagtgatgtaccaaatggatcagctttgacacaagagaatatcagcctcctg
tcaaacaagaccagctctctgaacctatcagaggaccctgagggaggaggtgacaacaat
gactcccagagatcgggagttactcccagttctgctccctaa
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