Felis catus (domestic cat): 101097381
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Entry
101097381 CDS
T02385
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fca
Felis catus (domestic cat)
Pathway
fca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101097381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fca03041
]
101097381
Enzymes [BR:
fca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101097381
Spliceosome [BR:
fca03041
]
Complex A
U2 snRNP components
U2 related factors
101097381
Complex B
101097381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101097381
NCBI-ProteinID:
XP_011290104
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Position
X:complement(59344645..59349666)
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AA seq
1030 aa
AA seq
DB search
MGRESRHYRKWSASRGRSGSRSISRSPDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR
SRDWKRLRLSRSRERDRSREQRRSRSQDRRCSRSRSRGRRSRSSSPGNKSKKAENRSRSK
EKTDSGESSKEKKKDXDDKEDEKEKDAGNFDQNKLEEEMRKRKEXVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDSLDAYMEEVKEEVKK
FNMRSVKGAGGNEKKSGPTVTKVVTVVTNKKAVVDSDKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGIT
VKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQAIPAIMSRRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKERKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLGRVTYVVLDLADRMFDMGFEP
QVMRIVDNVHPDQQTVMFSATFPRAMEALAHRILSKPIEVQVGGRSVVCSDVEQQVIVIE
EEKKFLKLLELLGHYQELGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGTCKLLIATSVAARGLDVKHLILVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTF
ITEDQARYAGDIIKALELSGTAVSSDLEKLWSDFKDQQKSEGKIIKKSSGFSGKGFKFDE
TEQALANERKKLQKAALSLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAPT
VGNAEKLEIAKRLALRINAQKNLGIESXVDVMQQATNAILRGGTILAPTVSAKTIAEQLA
EKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEISDFPQTARWKVTSKEALQRISEY
SEAAITIRGTYFPPGKEPKEGEWKIYLAIESANELAVQKAKAEITRLIKEELIQLQNSYQ
PTNKGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccattatcggaagtggtcagcatcaagggggcgctctggaagt
cgatctataagtcgctcacctgacaaaagaagtaaacgtggagatgacaggcggtccaga
agcagagatagagatagaaggagagagaggtctcgtagcagggataaaagaagatctcgg
tcaagagactggaagcgcctgagactttccagaagtagagagagagatcgaagtcgagag
caaagaagatctcgaagtcaagacaggagatgctccaggagtagaagccgaggccggcga
tccagatcctcaagtcctggcaataaaagcaagaaagctgagaataggtctaggtccaaa
gagaaaacagatagtggggaaagttctaaagagaagaaaaaagacnnagatgacaaggag
gatgaaaaagaaaaagatgctggtaactttgatcagaataagctggaagaagaaatgagg
aagcgaaaagaatgagtagaaaaatggcgagaggagcaacgtaaaaaggccatggaaaac
attggggaactgaaaaaggaaatagaagagatgaaacaagggaaaaaatggagtttagaa
gatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatggag
ggtgaggagttagattcattagatgcttacatggaagaagtgaaagaggaagtaaaaaag
tttaatatgcgaagtgtgaagggtgctggagggaatgaaaagaagtctgggccaacagtc
acaaaagttgtcactgtagtgacaaacaaaaaagcagtggtagattctgataagaagaaa
ggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaagtt
gatcttcagacggcccttacaggctaccagacaaaacagagaaagcttctagaaccagtg
gatcatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttccagaa
ttagcaaaaatgtctcaagaggaggtaaatgtttttcggttggaaatggaaggcattact
gtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttccatg
aagatcctaaattctctcaaaaagcatggctatgaaaaacccacgccaatccagtcccag
gcgattcctgctataatgtctagacgagatttgattggtattgccaagacaggaagcgga
aagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcattagaa
gaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaaatt
actaaagaacgtaagaagttttcaaagaccctgggacttagagtggtctgtgtttatgga
ggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtttgc
acacctggtcgaatgattgacatgttagcagctaatagtggtcgggtcacaaatcttgga
agagtaacatatgttgttttagacctagcagacagaatgtttgacatgggttttgaacca
caggtcatgcgcattgtggataatgtccatcctgatcaacagacagttatgttttcagct
actttccccagagctatggaggctttggctcacagaatcctcagtaaacccattgaagtg
caggttggaggcagaagcgtggtttgctcagatgtggaacaacaagtgattgtgattgaa
gaagaaaagaagttcttgaagttacttgagcttctcggccattatcaagaattgggatct
gtcattatatttgtggataagcaggaacatgcagatggtcttctgaaagatttaatgaga
gcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagcatc
ataaatgacttcaagaatgggacctgcaaacttctcatagccacttctgttgctgcccga
ggtttagatgtgaaacatctgattcttgtaaattacagctgccccaaccattatgaggat
tatgtgcacagagcgggacggactggaagagcaggcaataaaggttatgcgtatactttt
atcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattgtcagga
actgcggtgtcttctgatctggagaaactttggagtgatttcaaagatcagcagaaatct
gaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagtttgatgaa
acagaacaagctttggctaatgagaggaagaaattgcaaaaagcagctctcagtttgcaa
gattcagatgatgaggatgctgcagtcgacattgatgaacaaattgaaagtatgtttaat
tcaaagaagagagtaaaagatatggctgctcctggaacatctagtgttcctgctccaact
gtgggaaatgctgagaaattagaaatagctaagagactggctcttagaatcaatgctcag
aagaatttgggcattgagtcttaggtagatgtgatgcaacaggccaccaatgcaattctc
agaggcggcaccatcctggctcccactgtgtctgcaaaaaccattgcagagcaacttgct
gaaaagatcaatgctaagctcaattatgtgcctttggagaaacaagaagaggagaggcaa
gatggtggacagaatgaatcttttaaaagatatgaagaagaattagagatcagtgacttc
ccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagtgaatat
tctgaagctgcaattacaatcagaggaacatatttcccacctggcaaagaacctaaggaa
ggagagtggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaagca
aaggcagaaatcaccagacttataaaagaagaactgatccagctgcaaaattcataccaa
ccaacaaataaaggaagatacaaagtcttataa
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