Felis catus (domestic cat): 101097459
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Entry
101097459 CDS
T02385
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
fca
Felis catus (domestic cat)
Pathway
fca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101097459 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fca03019
]
101097459 (XAB2)
03041 Spliceosome [BR:
fca03041
]
101097459 (XAB2)
Messenger RNA biogenesis [BR:
fca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101097459 (XAB2)
Spliceosome [BR:
fca03041
]
Complex B
Other components
Prp19-related factors
101097459 (XAB2)
Complex C
101097459 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
101097459
NCBI-ProteinID:
XP_003981858
UniProt:
M3VWX6
LinkDB
All DBs
Position
A2:6145406..6158273
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AA seq
857 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGGDEDEDEDEMDLEPNEVR
LEQQSVPAAVFGSLKED
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcgcggccggagcggccggaccttgttttcgaggaagag
gacctcccctacgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacattgagttcaagcagggtgccccgaagccgaggctcaatcagctgtacgagcgggcc
ctgaagctgctgccctgcagctacaaactctggtaccgatatctgaaggcgcgccgggca
caggtgaagcatcgctgcgtgaccgacccggcctacgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacggctgtggctggactattgccagttcctg
atggaccagggccgaatcacacacacccgccgcactttcgaccgcgctctccgggcactg
cccatcacgcagcactctcgcatctggcccctgtacctgcgcttcctgcgctcacacccg
ctacctgagacggccgtgcggggctaccggcgcttcctcaagctgagccccgagagtgca
gaggagtacatcgagtatctcaagtccagtgaccggctggatgaagccgcgcagcgcctg
gccaccgtggtgaacgacgagcgctttgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcactcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggctgactactacatccgcagcggccacttcgagaaggctcgagacgtgtacgag
gaggccatccggactgtgatgaccgtgcgcgacttcacccaggtgttcgacagctacgca
cagtttgaggagagcatgatcgcagccaagatggagacggcctcagaactggggcgggag
gaggaagatgacgtggacctggagctgcgcctggcccgcttcgagcagctcattggccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccacatcacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccccgggagatcatcaacacatacacggag
gccgtgcagacggtggaccctttcaaggctacaggcaagccccacacactgtgggtcgcg
tttgccaagttttacgaggacaatgggcagctggacgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgtgagtgtggc
gagctggagctccggcacgagaactacgaccaggctttgcggctgctgcggaaggccacc
gcgctgcctgcccgccgagccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tacaagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctgggcaccttc
cagtccaccaaggccgtctacgaccgcatcctggatctgcgtatcgccacgccccagatt
gtcatcaactacgccatgttcttggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaacgtgtctgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcgcgggacctcttc
gaacaggcgctggacggctgccctcccaaatacgcgaagacgctgtacctgctgtacgcc
cagctggaggaagagtggggcctggcccggcacgccatggcagtgtacgagcgcgccacc
cgggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgtgcggcc
gagatctacggggtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtcg
gacgaacacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggcgag
atcgaccgggcgcgggccatctacagcttctgctcccagatctgtgacccccggaccacc
ggggctttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctcgcc
cccgggcagagcggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gacgcatcccgggaggagctggccgagctggcccagcaagccaacccggaggagatcgag
ctagggggggacgaggacgaggacgaggacgagatggatctggaacccaacgaggtgcgg
ttggagcagcagagtgtgccggctgccgtgttcgggagcctgaaggaggactga
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