KEGG   Felis catus (domestic cat): 101097459
Entry
101097459         CDS       T02385                                 
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
fca  Felis catus (domestic cat)
Pathway
fca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101097459 (XAB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fca03019]
    101097459 (XAB2)
   03041 Spliceosome [BR:fca03041]
    101097459 (XAB2)
Messenger RNA biogenesis [BR:fca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101097459 (XAB2)
Spliceosome [BR:fca03041]
 Complex B
  Other components
   Prp19-related factors
    101097459 (XAB2)
 Complex C
    101097459 (XAB2)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_12 TPR_2 TPR_8 Suf TPR_19 TPR_15 ARM_TT21 ARM_TT21_C TPR_1 TPR_NPHP3
Other DBs
NCBI-GeneID: 101097459
NCBI-ProteinID: XP_003981858
UniProt: M3VWX6
LinkDB
Position
A2:6145406..6158273
AA seq 857 aa
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGGDEDEDEDEMDLEPNEVR
LEQQSVPAAVFGSLKED
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggtggtgatggcgcgtctttcgcggccggagcggccggaccttgttttcgaggaagag
gacctcccctacgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacattgagttcaagcagggtgccccgaagccgaggctcaatcagctgtacgagcgggcc
ctgaagctgctgccctgcagctacaaactctggtaccgatatctgaaggcgcgccgggca
caggtgaagcatcgctgcgtgaccgacccggcctacgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacggctgtggctggactattgccagttcctg
atggaccagggccgaatcacacacacccgccgcactttcgaccgcgctctccgggcactg
cccatcacgcagcactctcgcatctggcccctgtacctgcgcttcctgcgctcacacccg
ctacctgagacggccgtgcggggctaccggcgcttcctcaagctgagccccgagagtgca
gaggagtacatcgagtatctcaagtccagtgaccggctggatgaagccgcgcagcgcctg
gccaccgtggtgaacgacgagcgctttgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcactcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggctgactactacatccgcagcggccacttcgagaaggctcgagacgtgtacgag
gaggccatccggactgtgatgaccgtgcgcgacttcacccaggtgttcgacagctacgca
cagtttgaggagagcatgatcgcagccaagatggagacggcctcagaactggggcgggag
gaggaagatgacgtggacctggagctgcgcctggcccgcttcgagcagctcattggccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccacatcacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccccgggagatcatcaacacatacacggag
gccgtgcagacggtggaccctttcaaggctacaggcaagccccacacactgtgggtcgcg
tttgccaagttttacgaggacaatgggcagctggacgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgtgagtgtggc
gagctggagctccggcacgagaactacgaccaggctttgcggctgctgcggaaggccacc
gcgctgcctgcccgccgagccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tacaagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctgggcaccttc
cagtccaccaaggccgtctacgaccgcatcctggatctgcgtatcgccacgccccagatt
gtcatcaactacgccatgttcttggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaacgtgtctgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcgcgggacctcttc
gaacaggcgctggacggctgccctcccaaatacgcgaagacgctgtacctgctgtacgcc
cagctggaggaagagtggggcctggcccggcacgccatggcagtgtacgagcgcgccacc
cgggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgtgcggcc
gagatctacggggtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtcg
gacgaacacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggcgag
atcgaccgggcgcgggccatctacagcttctgctcccagatctgtgacccccggaccacc
ggggctttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctcgcc
cccgggcagagcggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gacgcatcccgggaggagctggccgagctggcccagcaagccaacccggaggagatcgag
ctagggggggacgaggacgaggacgaggacgagatggatctggaacccaacgaggtgcgg
ttggagcagcagagtgtgccggctgccgtgttcgggagcctgaaggaggactga

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