Felis catus (domestic cat): 101098228
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Entry
101098228 CDS
T02385
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X3
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
fca
Felis catus (domestic cat)
Pathway
fca04120
Ubiquitin mediated proteolysis
fca04137
Mitophagy - animal
fca04141
Protein processing in endoplasmic reticulum
fca05012
Parkinson disease
fca05014
Amyotrophic lateral sclerosis
fca05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101098228 (PRKN)
04120 Ubiquitin mediated proteolysis
101098228 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101098228 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
101098228 (PRKN)
05014 Amyotrophic lateral sclerosis
101098228 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
101098228 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fca04131
]
101098228 (PRKN)
04121 Ubiquitin system [BR:
fca04121
]
101098228 (PRKN)
03029 Mitochondrial biogenesis [BR:
fca03029
]
101098228 (PRKN)
Enzymes [BR:
fca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
101098228 (PRKN)
Membrane trafficking [BR:
fca04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
101098228 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
101098228 (PRKN)
Xenophagy
Other xenophagy associated proteins
101098228 (PRKN)
Ubiquitin system [BR:
fca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
101098228 (PRKN)
Mitochondrial biogenesis [BR:
fca03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
101098228 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Crinkler
Motif
Other DBs
NCBI-GeneID:
101098228
NCBI-ProteinID:
XP_003986754
LinkDB
All DBs
Position
B2:complement(144392384..145733801)
Genome browser
AA seq
462 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRDDLTVQSCD
LDQQSIVHVVLRPWRKGPEREGGDGPQNALEGSRREPESLTRVDLSSSVLPAHSVGLAVI
LNNDREETLPAGRPAGRPPYNSFYVYCKGPCQRIQPGKLRVRCGTCRQATLTLAQGPSCW
DDVLIPNQMTGECQTASCPGTIAEFFFKCGAHPTADKETSVALNLITTNSRGITCITCTD
IRSPVLVFQCNHRHVICLDCFYLYCVTRLNDRQFIHDPQLGYSLPCVAGCPNSLIKELHH
FRILGEEQYNRYQQYGAEECVLQMGGVLCPHPGCGAGLLPEPGRRKVTCEGGNGLGCGFA
FCRDCKEAYHEGECSTLFEASGAVSQAYRVDEKAAEQARWEEASKETIKKTTKPCPRCHV
PVEKNGGCMHMKCPQPQCRLEWCWACSCEWNRACMGDHWFDV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgaccag
ttgcgtgtgattttcgccgggaaggagcttagggatgacttgactgtgcagagctgtgac
ctggaccagcagagcatcgttcatgttgtgctgagaccctggagaaaaggcccagaaagg
gaaggaggtgatggcccacaaaacgccctggagggctcgaggagagagcccgagagcttg
acccgtgtggacctcagcagctcggtcctccctgcgcactcggtgggtctggctgtgatc
ctgaataatgaccgtgaggagaccctgccagctggaaggccagcaggtagaccgccttac
aacagcttttacgtttattgcaaaggcccctgccaaagaatacagccaggaaaactcagg
gtgcggtgtggtacctgccgacaggcgacgctcaccttggcccagggtccgtcttgctgg
gacgatgtcttaatcccaaaccagatgactggtgaatgtcaaactgcaagctgtcctggg
actatagccgaatttttctttaaatgtggagcacacccaaccgctgacaaggaaacatca
gtggctttgaacctgatcacaacaaacagtcgaggcatcacctgcataacatgtaccgac
atcaggagccctgtcctggttttccagtgcaaccatcgccacgtgatttgcttagactgt
ttctacttatactgtgtgacaagacttaacgacaggcagtttatccatgaccctcagctg
ggctactctctgccgtgtgtggctggctgccccaactccttgattaaagagctccatcac
ttcaggatccttggagaagagcagtacaaccggtatcagcaatatggcgctgaagagtgt
gtgctccagatggggggcgtgctgtgccctcaccctggctgtggagcagggctgcttccc
gagccaggcaggaggaaggtcacttgtgaagggggaaacggtctgggctgcgggttcgcc
ttttgccgggactgtaaggaagcgtaccatgaaggtgaatgcagcaccctgtttgaagcc
tcaggagcagtttctcaggcctacagagttgacgagaaggccgcggaacaagctcggtgg
gaagaggcctctaaagaaacaatcaagaaaaccaccaagccctgtccccgttgccatgtg
ccagttgaaaaaaatggaggatgcatgcacatgaagtgcccgcagccccagtgccgtctg
gagtggtgctgggcctgcagctgcgagtggaaccgcgcctgcatgggggaccactggttc
gacgtgtag
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