Felis catus (domestic cat): 101098500
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Entry
101098500 CDS
T02385
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
fca
Felis catus (domestic cat)
Pathway
fca03020
RNA polymerase
fca03420
Nucleotide excision repair
fca05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101098500 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
101098500 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101098500 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fca03021
]
101098500 (POLR2A)
03400 DNA repair and recombination proteins [BR:
fca03400
]
101098500 (POLR2A)
Enzymes [BR:
fca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101098500 (POLR2A)
Transcription machinery [BR:
fca03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101098500 (POLR2A)
DNA repair and recombination proteins [BR:
fca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101098500 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101098500
NCBI-ProteinID:
XP_044900952
LinkDB
All DBs
Position
E1:2385235..2409423
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLAKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RFARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagcga
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtccgtgaccgaggggggt
atcaaataccccgagacgactgagggaggccgccccaagcttggggggctgatggatcca
aggcagggggtgatcgagcggactggccgctgccagacctgtgcaggaaacatgacagag
tgccctggccactttggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacgatgaaagttctgcgctgtgtctgcttcttctgctccaaacttcttgtggac
tctaacaacccgaagatcaaggacattctggccaagtccaaggggcagcccaagaagcgg
ctcacacacgtgtacgacctgtgcaagggcaagaacatctgcgagggcggagaggagatg
gacaataagttcggtgtggagcagccggagggcgacgaggacctggccaaggagaagggc
cacggtggctgcgggcggtaccagcccaggatccggcgctccggcctcgagctgtatgcc
gagtggaagcacgtcaacgaggactcgcaggagaagaagatcctgctgagtcccgagcgc
gtgcacgagatcttcaagcgcatctccgacgaggagtgtttcgtgctgggcatggagccc
cgcttcgcgcggcccgagtggatgatcgttacggtgctgcccgtgcccccgctgtccgtg
cggcccgccgtcgtgatgcagggctccgcccgcaaccaggacgacctgacgcacaagctg
gccgacatcgtgaagatcaacaaccagctgcggcggaacgagcagaacggcgcggcggcg
cacgtcatcgccgaggacgtgaagctcctccagttccacgtggccaccatggtggacaac
gagctgcccggcctgccccgcgccatgcagaagtccggacgccccctcaagtccctgaag
cagcggttgaagggcaaggaaggccgggtccgggggaacctgatgggcaagcgagtggac
ttctcggcccgcaccgtcatcacccccgaccccaacctctccatcgaccaggtcggcgtg
ccccgctccatcgctgccaacatgacttttgcggagatcgtcacgcccttcaacatcgac
agacttcaggagctggtgcgcagggggaacagccagtacccgggcgccaagtacatcatc
cgggacaacggcgatcgtatcgacctgcgtttccaccccaagcccagtgaccttcacctg
cagaccggctacaaggtggagcggcacatgtgcgacggagacattgttatcttcaaccgt
cagccgactttgcacaaaatgtccatgatggggcatcgggtccgcatcctgccctggtcg
actttccgcttgaatctgagcgtgaccactccgtacaatgctgattttgacggggacgag
atgaacttgcacctgccacagtctctggagacccgggcggagatccaggagctcgccatg
gtgccacgcatgatcgtcaccccccagagcaatcgccccgtcatgggcatcgtgcaggac
acgctcaccgcagtgcgcaaattcacaaagagagacgtcttcttggagcggggtgaggtg
atgaacctcctgatgttcctgtccacgtgggacgggaaggtcccacagccagccattctg
aagccccgtcccctctggacgggcaagcagatcttctccctcatcataccgggccacatc
aactgcatccgcacccacagcacccatcccgacgatgaggacagtggtccctacaagcac
atctctcccggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcttg
tgtaagaagtccctgggcacgtctgccggctcgctggtccacatctcgtacctggagatg
ggtcacgacatcactcgcctcttctactccaacattcagaccgtcattaacaactggctg
ctcatcgagggtcataccattggcatcggggactccattgcggactctaaaacttaccag
gacattcagaacacgatcaagaaggccaagcaggatgtgatagaggtcatcgagaaggct
cataacaatgagctggagcccaccccggggaatactctgcggcagacgtttgagaaccag
gtgaaccgcattctcaacgacgcccgagacaagaccggctcctccgcccagaagtccctg
tctgaatacaacaatttcaagtctatggtcgtgtccggggccaaaggttccaagatcaac
atctcccaggtcatcgccgtcgtcgggcagcagaacgtagagggcaagcggatcccgttc
ggcttcaagcaccggaccctgccccacttcatcaaggacgactacgggcccgagagccga
ggcttcgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccatgcc
atggggggtcgcgaggggctcatcgacaccgctgtcaagacagctgagactgggtacatc
cagcggcggctcatcaagtccatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaaccaggtggtgcagctccgctacggcgaggacggcctggccggcgagagc
gtcgagttccagaacctggccaccctcaagccgtccaacaaggcttttgagaagaagttc
cgcttcgattacaccaacgagagggccctgcggcggactctgcaggaggacctggtgaag
gacgtgctgagcaacgcgcacattcagaacgagctggagcgcgaattcgagcggatgcgt
gaggatcgggaggtgctcagggtcatcttcccaaccggcgacagcaaggtggtcctcccc
tgcaacctgctgcgcatgatctggaacgcgcagaagatcttccacatcaaccctcgcctc
ccctccgacctgcaccccatcaaggtcgtagagggagtcaaggaattgagcaagaagctg
gtgatcgtgaatggggacgaccccctgagccggcaagcccaggagaacgccacgcttctc
ttcaatatccacctgcgctccacgctgtgctcccgccgcatggccgaggagttccggctc
agcggggaggccttcgactggctgctcggagagatcgagtccaagttcaaccaagccatc
gcccatcccggggagatggtgggggccctggctgcacagtcccttggagagcccgccacc
cagatgaccttgaacaccttccactacgccggcgtgtctgccaagaacgtgaccctgggc
gtgccgcgactcaaggagctgatcaacatttccaagaaaccaaagaccccgtcactcacg
gtcttcctgctgggccagtctgctcgggacgccgagagggccaaggacattctgtgccgc
ctggagcatacgacgttgaggaaggtgaccgccaacacagccatctactacgaccccaac
ccccagagcacagtggtggccgaggaccaggagtgggtgaacgtctactatgagatgcct
gactttgacgtggcgcgaatctccccctggcttttgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgaaaagatcaatgctggttttggc
gatgacttgaattgcatctttaacgacgataacgcggagaagctggtgctgcggatccgc
atcatgaacagcgacgagaacaagatgcaggaggaagaagaggtggtggacaagatggac
gacgacgttttcctgcgctgcatcgagtccaacatgctgacggacatgaccctgcagggc
attgagcagatcagcaaggtgtacatgcacctgccgcagacggacaacaagaagaagatc
atcatcacggaggacggagaattcaaggccctgcaggagtggatcctcgagaccgacggt
gtgagcctgatgcgggtgctgagtgagaaggacgtggaccctgtgcgcaccacgtccaac
gacatcgtggagatcttcacggtgctgggcatcgaagccgtgcggaaggccttggagcga
gagctctaccacgtcatctcctttgacggttcctacgtcaattaccgccacttggctctc
ctgtgtgataccatgacctgtcggggccacttgatggccatcacgcgacacggggttaac
cgccaggatacgggacctctcatgaaatgctcctttgaggaaacggtggatgtgctcatg
gaagcggccgcgcacggagagagcgaccccatgaagggggtgtctgagaacatcatgctg
ggccagctcgctccggccggcaccggctgcttcgacctcctgctcgacgcggagaagtgc
aagtacggcatggagatccccaccaacatccccggcctgggggccgccggacccactggc
atgttcttcggctcagcgcccagtcccatgggagggatttctccggccatgactccctgg
aaccagggtgccactccggcctatggcgcctggtctcccagtgtcggaagtgggatgacc
ccgggggcagctggcttctcccctagcgctgcttcggatgccagcggcttcagtccaggc
tactcccctgcgtggtcccccacgccaggctcgccgggctccccgggcccctcgagcccc
tacatcccctcaccaggtggtgccatgtctcctagctactcacccacgtctcctgcctac
gagcctcgctcccccgggggctacacaccccagagcccctcctactcccctacctcgccc
tcctactccccgacctctccgtcctactctcccaccagtcctaactatagccccacgtca
cccagctactccccaacctcccccagctactctcccacgtctcccagctactccccgact
tctcccagctactccccgacctctcccagctactctccaacttccccgagctattctccc
acctctcccagctactccccgacctctcccagctactctcccacttctcccagctactcc
ccgacctctcccagctactccccgacctctcccagctactcccccacatcccccagctac
tcccccacatcccccagctattctcccacatcccccagctactccccaacatccccgagc
tattccccgaccagccctaactactctccgaccagtcccaattataccccaacgtccccc
agctatagcccaacatcacccagctactccccgacgagccccaactacacaccgacaagc
cctaactacagcccaacctctcccagctactccccgacctcgcccagctactccccgacc
tcgcccagctactccccgtcaagcccacgatacacaccgcagtctccgacctacaccccg
agctcccccagctacagccccagctcccccagctacagccccacctcgccgaagtatacc
cccaccagtccctcttacagccccagttccccagaatacaccccgacctcccccaagtac
tcacccacctcccccaagtactcacccacctcccccaagtactcacccaccagccccacc
tactcacctaccaccccaaaatattccccaacgtctcctacttactcgccaacctctccg
gtctataccccaacctcccccaagtactcgcctaccagccccacctactcgcccacctcc
cccaagtactcgcccaccagccccacctactcgcccacctcccccaaaggctccacctac
tcgcccacctcccccggctactcgcccaccagccccacctacagcctcaccagcccggcc
atcagcccagacgacagtgatgaggagaactga
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integrated database retrieval system
