Felis catus (domestic cat): 101100507
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Entry
101100507 CDS
T02385
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
fca
Felis catus (domestic cat)
Pathway
fca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101100507 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fca03019
]
101100507 (PATL1)
Messenger RNA biogenesis [BR:
fca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101100507 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
101100507 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
101100507
NCBI-ProteinID:
XP_003993463
UniProt:
A0ABI8AQ56
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All DBs
Position
D1:complement(103931678..103963696)
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AA seq
770 aa
AA seq
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MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLTQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFSQQILCPKPVHVRPPMPPRYPAPYSERASPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAPPPPQQHSPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALADERKHKICCMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSAAAPAPSNPHLAAVLQNKFGLSLLLVILSRGEDLQSSEPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctggacgaagatgaagatgcctttcag
ggcttgggagaggaagatgaagagattgatcaattcaatgatgatacgtttgggtcaggt
gcagttgatgatgactggcaggaagcacatgagcgcctggctgaactggaagagaagctc
ccagcggcagttaatgaacaaacgggcaatggagaaagggatgagatggacttgctgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgagaatgagctagaa
gatccagctatcatgagggcagtgcagaccaggccagtcctgcaaccccaaccagggagt
ctcaattccagcatctgggatggatcagaagttctgaggcgaatccgaggaccactgcta
actcaggaaatgcctacagtgtctgtattagaatatgccctgcctcagaggcccccacag
ggcccagaagatgatcgggacctttctgagcgtgctttgccgcggcggtccacgtcacct
gtcatcgggagccctcctgttagagccgtccccataggcaccccacctaagcagatggct
gtacccagcttcagccaacagatcctgtgtccgaagcctgtccatgtccggcccccgatg
ccaccgcgctatcctgctccctacagtgagagggcgtccccaaaccagctctgcagtgtc
ccgaactcttccctgctgggtcaccctttccctcctagtgttcctcctgtcctcagcccc
ctccagagagcacagcttctgggaggagcacagctgccgcctggacggatgtctcccagc
cagtttgcacgggttcctggatttgttggtagcccgcttgccgccatgaatcccaagttg
ctgcaagggcgagtggggcaggtgctgcccccagcgccgggcttccgtgccttctttagt
gctgcaccccccgccccaccgcctccccagcagcactcccccggcccagggcctcacctg
caaaacctaaggtctcaggccccgatgtttagaccagacacaactcacctccatccccag
caccgtcggctcttgcatcagaggcagcagcagaacagaaatcagcatcggagtcttaac
ggtgcgggagatagaggaagtcaccggagcagccatcaggaccatctccgaaaggacccc
tacgccaacctcatgctgcagcgagagaaagactgggtctctaaaatccagatgatgcag
ctacagagcactgacccctacctggacgatttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaagtgcaaggtgaaggccctaaaaaggagcgtaccaag
ctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagtttgagggc
tctctgggaaagctcactgtctctagtgtgaataatccccgaaagatgatcgatgctgtt
gtgacatctcggagtgaggatgacgagacgaaagaaaaacaggttcgggacaagagacga
aaaaccctggtcataattgagaaaacctacagtttactccttgatgtggaagattatgaa
aggcggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaagcac
aaaatttgttgcatgtatgacaacttaagggggaaattgcctggacaagagaggccaagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaatctc
cctttccttatcaagaaggatgcccaagatgaggtgctgccatgcttactgagtcccttc
tccctcctgctctatcaccttccatcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcagagcgcagccgcgccagcgccctctaaccctcacctcgctgctgtgctc
cagaacaagtttggcctgtcactgctcctcgtcatcctgagccgtggggaagacctacag
agttcagagcctgctacagaatccacacagaacaaccagtggacagaggtgatgttcatg
gcgacccgagaacttctgcggattccccaagcagccctggccaagccaatctcaataccg
acaaacctggtatccctcttttctcgctatgttgaccgacagaaactgaacttgctggaa
acaaagctgcagctagttcaggggatacgataa
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