Flavobacterium channae: LOS89_00625
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Entry
LOS89_00625 CDS
T08502
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOS89_00625 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcb03019
]
LOS89_00625 (rnc)
03009 Ribosome biogenesis [BR:
fcb03009
]
LOS89_00625 (rnc)
03036 Chromosome and associated proteins [BR:
fcb03036
]
LOS89_00625 (rnc)
Enzymes [BR:
fcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LOS89_00625 (rnc)
Messenger RNA biogenesis [BR:
fcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOS89_00625 (rnc)
Ribosome biogenesis [BR:
fcb03009
]
Eukaryotic type
90S particles
RNase
LOS89_00625 (rnc)
Prokaryotic type
rRNA processing factors
LOS89_00625 (rnc)
Chromosome and associated proteins [BR:
fcb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LOS89_00625 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DUF7515
DSRM_2
Mycovirus_RNAse
Motif
Other DBs
NCBI-ProteinID:
UGS23794
LinkDB
All DBs
Position
complement(135803..136546)
Genome browser
AA seq
247 aa
AA seq
DB search
MRRLFNKIRKNSRSPEDGIFFEKITKILGFQPNELKYYKKAFTHRSANKVDEKGNPFNYE
RLEFLGDAMLGSVIAAHLYSEVPSGDEGYLTKMRSKIVSREHLNELGRDFNLVQFVESKV
NSSQFGENIHGNLFEAFIGAIYLDKGFTYCEKFIQNKIIKQYVDIAKLEGKVISYKSLII
EWCQKEKAPFAFDFIEDNGQEGQKYFSVKLSINNKIIAKARATSKKKAEEKAAQRAYFAL
QEKISKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtttatttaataaaatacgaaaaaattcccgttctccagaagacgggattttt
tttgaaaaaattacgaaaatccttggttttcagcccaatgaattaaaatattacaaaaaa
gcatttactcatcgctcagctaataaagtagacgaaaaaggaaatccttttaattatgag
cgcttagaattccttggcgatgctatgttaggaagtgttatagctgctcatttatatagt
gaagttccttcgggagatgaaggttatttgacaaaaatgcgctctaaaattgtaagtaga
gaacatttgaatgaactaggtcgtgatttcaacttagtccaatttgtagaaagtaaagtc
aattcgagtcaatttggagaaaacattcatggtaatttgtttgaagcatttattggcgcc
atttatttagataaagggtttacttattgcgaaaaatttattcaaaataaaattattaaa
caatatgttgatattgctaaattagaaggtaaagtcatcagttacaaaagtttaattatc
gaatggtgtcaaaaagaaaaagctcctttcgcttttgattttattgaagataatggtcaa
gaaggacaaaaatatttcagcgtaaaattgtcaattaacaacaaaattattgctaaagct
cgagctacttcaaagaaaaaagcggaagaaaaagcagctcaaagagcctattttgcatta
caagaaaaaatttcaaaaaaataa
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