Flavobacterium channae: LOS89_01235
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Entry
LOS89_01235 CDS
T08502
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcb03019
]
LOS89_01235
03009 Ribosome biogenesis [BR:
fcb03009
]
LOS89_01235
Messenger RNA biogenesis [BR:
fcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOS89_01235
Ribosome biogenesis [BR:
fcb03009
]
Prokaryotic type
rRNA processing factors
LOS89_01235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
Motif
Other DBs
NCBI-ProteinID:
UGS24961
LinkDB
All DBs
Position
292602..294146
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AA seq
514 aa
AA seq
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MNKELIIRSGSDAVDFALLKDGKLIELHKEEEKQSNFAVGDIFIAKIRKPVAGLNAAFVN
LGYEKDAFLHYHDLGPNLSSLMKFIKLVSAGKLKDYSLKNFPFEAEIDKDGAITDILSAN
QSVLVQVVKEPISTKGPRISSEISLAGRYVVLVPFSDRVSVSQKIESREEKDRLKRLVQS
IKPKGFGVIVRTVAEGKKVAELDKDLQTLLDRWSAMCRRLQTAHHPSKVLGELNKASSIL
RDVFNDTFTGIHVDDEDLYLETKEYLQEIAPDKVSIVKHYQSKELPLFEKYNIERQIKTS
FGKTVSMSKGAYLIIEHTEALHVIDVNSGNRSSKATSQEDTALEVNMIAAAEIARQLRLR
DMGGIIVVDFIDMQNPENRKVLYDFLKEEMSDDKAKHKILPPSKFGLIQITRQRVRPEVN
IKTREEDPNKENGEIEAPILIIDKIASDLERIIKDHKKVVLNAHPFVAAYLTKGFPSLRS
KWFFEYKKWVKIIPRDAYTYLEYHFFDRQGNEIK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagttaattattcgatcaggttcagacgctgtagattttgccttattaaaa
gatggaaaactaattgaattacacaaagaagaagaaaagcaaagcaattttgcggtaggt
gatatttttattgccaaaatacgcaaacctgttgcaggattaaatgctgcatttgtaaac
ttaggatatgaaaaagatgcttttttgcattatcatgatttaggtccgaatttatcttct
ttgatgaaatttattaaacttgtaagcgcaggtaaattaaaagattattcactcaaaaat
tttccttttgaagctgaaattgataaagatggtgctataaccgacattctaagtgccaat
caatcagttttagttcaagtagtaaaagaacctatttccacaaagggtcctagaattagt
tctgagatttctttagcaggtagatatgtagttttagttcctttttcagatcgtgtttct
gtttctcaaaaaatagaatcaagagaagaaaaagatcgattaaaacgattggttcaatct
atcaaaccaaaaggattcggtgttattgtgagaacagtagccgaaggcaaaaaagtagcc
gaacttgataaagatctgcaaacactgttagaccgctggtcggcaatgtgcagaagatta
caaactgctcatcatccatcaaaagtattaggagaacttaataaagcttcttcaatctta
agagatgtttttaatgatacctttactgggattcatgtagatgatgaagatttgtatctt
gaaacgaaggagtatttgcaagaaatagctcccgataaagtgtctatcgtaaaacactat
cagtctaaggaactgcctctttttgagaaatacaatattgaacgacaaataaaaacgtct
tttggaaaaacagtttccatgagcaaaggtgcttatttgattattgaacatacagaagct
ttacacgttattgatgtaaacagcggaaatcgttcaagcaaagcaactagccaagaagat
actgctctagaagtaaatatgattgctgcagctgaaattgcacgtcaattacgacttaga
gacatgggcggaattattgttgtggattttattgatatgcaaaatccagaaaatcgtaaa
gtattgtacgatttcttaaaagaagaaatgagtgacgataaggccaagcataaaatcttg
ccccctagtaaatttggattaattcaaattactagacaaagagttagaccagaagttaat
attaaaacaagagaagaagaccctaataaagaaaacggggaaattgaagctccaatttta
attattgacaaaatagcatctgaccttgaacgcattattaaagaccataagaaggttgtt
ctaaacgcacacccttttgtggcagcataccttactaaaggttttccatccttacgttcg
aaatggtttttcgaatataagaaatgggtgaaaattatacctcgtgacgcttacacgtat
cttgaatatcatttctttgatagacaaggaaatgaaattaaataa
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