Flavobacterium channae: LOS89_01545
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Entry
LOS89_01545 CDS
T08502
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00550
Peptidoglycan biosynthesis
fcb01100
Metabolic pathways
fcb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOS89_01545 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOS89_01545 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcb01011
]
LOS89_01545 (mrdA)
Enzymes [BR:
fcb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LOS89_01545 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fcb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LOS89_01545 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UGS23970
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All DBs
Position
complement(381386..383314)
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AA seq
642 aa
AA seq
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MRKILLPSVIIITSIILIARIFYLQVIDENLKLQSENNAIKKVFDFPERGYIYDRNGKLL
VANQPSYDIMVVPREIKNIDTTEFCSLLHISKADFIKKVEKAKVYSPMLPSVFLSQLNKA
EYAAFQEKERKFEGFYTQKRSLRDYQVKDGANIFGFITQVNEGILKKNKYYNSGDLIGKQ
GVEQQYEEILRGVKGVKYLLRDKHNKIIGPYKEGKFDTIAQQGKDLTLTIDHALQQYGTE
LMINKRGGIVAIEPKTGEILALVSAPTYDPALLVGRQRSKNYTALYNDSIAKPLYDRGLQ
ATYPPGSPFKIVTGLIGLQEEVIDEQTTFYCNHGFNFGRFMKCHCGLHTLQLNNGTYKSC
NTYFGNTYKRTIEKYKDSYYSVDNWANHVKSFGLGQFLGTDMPIGAKGLVPDSKLYKRAY
NGAKIRSSYIISNSIGQGEVLTSPIQLANMMAAVANEGYYYTPHIVKKIKGQSLDKKYTT
KHYTTIDKQYFQPIIQGMEDVYNFGTASGLKVEGIKICGKTGTAENKIRVAGKTYQLKDH
SIFVAFAPRENPKIALAVFIENGYWGSRWAGPIATLMIEKYLNGKISRKDLETRMLNGSI
EDEYRKIENIIYQRKVDPTRLQDSLNKVSIEISDAKKEEEEN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattctgttgccatccgtaatcataattacttcaattattctgattgctaga
attttttatcttcaggtaattgacgaaaatttaaaactacaatccgaaaataatgctatt
aaaaaagtattcgattttccggaaagaggctacatatacgatcgtaatggcaaactttta
gttgccaaccaaccatcttatgatatcatggtggttccgcgagaaattaaaaatatcgac
actaccgaattttgttcacttttacatatttcgaaagctgattttattaaaaaagtagaa
aaagcaaaagtatacagtcctatgttgccttctgtattcttatcgcaattgaacaaggca
gaatatgctgcttttcaagaaaaggaaagaaaatttgaaggtttctatactcaaaaacgt
tcacttcgtgactatcaagttaaagacggtgctaatatttttggttttatcacccaagta
aacgaaggtattttaaagaaaaacaaatactacaacagtggagatttaattggaaaacaa
ggagtagaacaacaatacgaggaaattttaagaggtgtaaaaggagtaaaatatttactt
cgcgataagcacaataaaattattggtccttacaaagaaggaaagtttgacaccattgca
caacaaggaaaagacttaaccttaactatcgatcacgctcttcaacaatacggtaccgag
ttgatgattaataaacgtggaggaattgtggctattgaaccaaaaacaggagaaatttta
gctttggtttcagcgccaacttatgatcctgctcttttagttggaagacaacgttctaaa
aactacacagcactttataacgattcgattgcaaaacctttatacgatagaggtttgcaa
gcaacataccctccaggttcgccatttaaaattgtaacaggattaattggcttacaggaa
gaagttattgacgaacaaactactttttattgtaatcacggatttaattttggtcgattc
atgaaatgtcactgtggtttgcacacattacaattgaacaatggaacttataaatcgtgt
aacacctactttggaaacacgtacaaaagaactattgagaaatataaagattcgtattac
agtgttgataattgggctaatcacgtaaaaagttttggattaggacaatttttaggaacc
gacatgcctattggagcaaaaggtttagttccggattcaaaattgtacaaacgagcttat
aatggagctaaaattagaagttcatatatcatttcaaactctattggacaaggagaagtt
ttaacttcgccaatacaattagcaaatatgatggcagctgtagctaatgaaggttattat
tacactcctcatatcgttaaaaagattaaaggacaaagtttagacaaaaagtacacaaca
aaacattacactacgattgataaacaatatttccaacctattatccaaggtatggaagat
gtatataattttggtactgcatctggattaaaagtcgaaggaattaaaatttgtggaaaa
actggaacagctgaaaacaagattagagttgctggaaaaacgtatcaattaaaagaccac
tctattttcgttgcttttgcacctcgcgagaatccaaaaattgctttggctgtatttatc
gaaaatggttattggggaagcagatgggctggtcctattgctactttaatgattgaaaaa
tatttaaatggtaaaataagccgaaaagacttggaaacaagaatgctaaatggcagtatt
gaagacgaatatagaaaaattgaaaatattatttatcaacgcaaagttgatccaacaaga
cttcaagattcacttaacaaagtaagcatagaaattagcgacgccaaaaaagaagaagag
gaaaattag
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