Flavobacterium channae: LOS89_01890
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Entry
LOS89_01890 CDS
T08502
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcb03400
]
LOS89_01890
Enzymes [BR:
fcb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LOS89_01890
DNA repair and recombination proteins [BR:
fcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LOS89_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UGS24039
LinkDB
All DBs
Position
complement(466965..468497)
Genome browser
AA seq
510 aa
AA seq
DB search
MKTLRLILGDQLNSKHSWFDEVNSDVVYVMVEMRQETDYVKHHIQKVVAFFLSMRNFSEE
LMNKGHQVIYYKISDANNPHDLEKLILVLVEKNKIDQFEYQFPDEYRLDEQLKAICKKLS
IPTKSVDSEHFYTSRNELDDFFKGKKQLLMESFYRMMRKKHDVLMVGDQPLDGKWNFDHN
NRNQYKNEVPIPFPLEFNKNVSEIVTEIESQNITTFGSIDRENFNWPTSRKESLQLIDYF
CEYLLAHFGTYQDSLFSGHKFLFHSRLSFAMNSKMISPKEVVDAVISYYYQNQETIELAQ
VEGFVRQIIGWREYVRGIYWKEMPNYSQINALENYNPLPDFFWTGKTKMKCMQHSISQSL
SEAYAHHIQRLMVIGNFSLLAQLHPDEVDAWYLGVYIDAIEWVEMPNTRGMSQYSDGGIV
ATKPYVSSGSYINKMSNYCGSCQYEVKEKLGEKACPFNSLYWHFLDEKKQHFANNQRMSM
MLALLKKMKPEELAATKEKAISILEDMENI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacttcgattaattttgggtgaccaactcaattcgaaacattcttggtttgat
gaagtcaactctgatgtggtttatgtgatggtagaaatgcgtcaggaaacggattatgta
aaacatcatattcaaaaagtagtagcgttttttctttctatgcgaaatttctcagaagaa
ctgatgaataaaggtcatcaagttatttattataaaatttcggatgccaataatcctcat
gatttagaaaaattgattttggttttggttgaaaagaataaaatcgaccaatttgaatac
caatttcctgatgaatatcgcttggacgagcaattgaaagccatctgtaaaaaactttcc
attcctacaaaatcagtagattctgaacatttttacacgtctagaaatgaattagatgat
tttttcaaagggaaaaagcaacttttgatggaaagtttctatcgcatgatgcgaaaaaaa
catgatgtattgatggttggtgatcaaccacttgacggaaaatggaattttgaccacaac
aaccgcaatcaatataaaaatgaagttccgattccgttcccattggaattcaataaaaat
gtaagcgaaattgttactgaaattgaaagccaaaacatcaccacttttggaagtattgat
agagaaaatttcaactggccgacttcaagaaaggaaagtttgcaattgattgactatttc
tgtgagtatttgttggcgcattttggaacgtatcaagattcgctatttagcggacataaa
tttctatttcactcgcgtttgtcttttgcaatgaattccaaaatgataagtccgaaagaa
gtggtggatgctgtgatttcctattattatcaaaaccaagagaccattgaattggcgcaa
gtagaaggttttgtgcgacaaattattggttggcgcgaatatgttagagggatttattgg
aaagagatgcccaattattcccaaatcaacgcattggaaaactacaatccgctacctgat
ttcttttggaccggaaaaaccaaaatgaaatgcatgcaacattcgatttctcaaagttta
tcggaagcgtatgcccatcatattcagcgtttgatggtgattggaaatttttctctatta
gcccaattgcatccggatgaagttgatgcttggtatttaggtgtctacatcgatgctata
gaatgggttgagatgccgaatacgcgtggtatgagtcaatattcggatggtggcattgtg
gcaacaaaaccgtatgtttcttcgggaagttacattaataaaatgagcaattattgtggc
agttgtcaatacgaagtaaaagagaaattgggcgaaaaagcgtgtccgtttaacagtttg
tattggcattttttagatgagaaaaagcagcattttgctaataatcaaagaatgagcatg
atgttagcattactcaaaaaaatgaaaccagaagaactagccgcaacgaaagaaaaagcg
atttcgattttggaagatatggaaaacatataa
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