Flavobacterium channae: LOS89_03250
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Entry
LOS89_03250 CDS
T08502
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
fcb
Flavobacterium channae
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM2_NFP
LysM_RLK
LysM3_LYK4_5
CHAP
Amidase_6
OB_DNA_ligase
Motif
Other DBs
NCBI-ProteinID:
UGS24297
LinkDB
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Position
750952..752283
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AA seq
443 aa
AA seq
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MKFIKSIFIIVFFLSCGNIFAQKTIEHKVVSGDSFYSIAKKYNVEEEAIYKLNPNLKGKV
LQLNTIIIIPNDKKSKIKGDNKTVKNKSDVYEVQSGDSFYSVALNNDLTVDDLKKYNPDV
SPKNLQIGQKINLKPVKTKKTKVEKETRIVENSSNDNTFHIVKKGETMSSISKKYGLKLA
DLLEMNKPLRTNLQIGDKVAIKKENLSIVEVDKPVDSSSNGLIAESNTSDDDVEEADDSG
EITHLVKKGETASSIARHYNVKLKELKKLNPRVGDKLSVGHKLIIKKGNVNNNIVVAEEE
SIEDIAPMSVENVTKADQLIAIASQNIGTRYRGGGKTEEGFDCSGLMCYTFDKLQISLPR
SSSSQSEIGKKIKRKNAQKGDLIFFSTNGRGTINHVGMITEIYEDDIRFIHSSVSSGVII
SSINEAYYTKRFKKIVRVLHDYQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcaaatccatttttattatcgtttttttcttatcctgtgggaatattttt
gcgcagaaaaccattgaacataaagttgttagtggtgattctttttattctatagctaag
aaatataacgtagaggaagaagcgatttataaattaaaccccaatttaaaagggaaggtt
ttacaattgaatactataattattattccgaatgataaaaaaagtaaaatcaaaggagat
aataaaacggtcaaaaacaaatcagatgtttacgaagttcaatcgggtgattctttttat
agtgttgctttaaataacgatttaactgttgacgacttaaaaaaatacaatccagatgtt
tctccaaagaatcttcaaattggacaaaaaattaatctgaaaccagttaaaacaaaaaag
actaaggttgaaaaggagactcgaatagtagaaaattcttcaaacgataatacttttcat
attgttaagaaaggtgaaacaatgtcttctatctctaaaaagtatggtttaaaactagct
gatttgttagaaatgaataagccattgagaacaaatcttcaaataggagataaagttgct
attaaaaaagagaatttaagcattgttgaagttgataaaccagttgatagttcatctaat
ggtttaattgcggaaagtaatactagtgatgatgatgttgaagaagctgacgattcggga
gaaattactcacttggtaaaaaagggagaaacagcaagtagtattgcacgtcattacaat
gtaaagctaaaagaattaaaaaagttaaatcctagagttggtgataaattgtctgttgga
cataaactaatcatcaaaaaagggaatgtcaataacaatattgtagtagcagaagaagag
agtattgaagatattgcgccaatgtcggttgaaaatgtaactaaggcagatcaattgatt
gctattgcttctcaaaatattggaactcgttatagaggtggcggaaaaacagaagaagga
ttcgattgttctggtttgatgtgttatacttttgataaattacaaattagtttaccaaga
agttcttcttcacaatccgaaatagggaagaagataaaaagaaaaaatgcacaaaaaggt
gatttgattttcttttcaacaaatggtagaggaacaattaatcacgtaggaatgattact
gaaatttacgaagatgatattcgttttatacattcttcggttagttctggagttatcatt
tcatctataaatgaagcttactatacaaaacgatttaagaaaatagtcagagtactacat
gattatcaataa
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