Flavobacterium channae: LOS89_03325
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Entry
LOS89_03325 CDS
T08502
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00920
Sulfur metabolism
fcb01100
Metabolic pathways
fcb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
LOS89_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcb03400
]
LOS89_03325
Enzymes [BR:
fcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
LOS89_03325
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
LOS89_03325
DNA repair and recombination proteins [BR:
fcb03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
LOS89_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
LARA_dom
Motif
Other DBs
NCBI-ProteinID:
UGS24310
LinkDB
All DBs
Position
complement(765001..766011)
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AA seq
336 aa
AA seq
DB search
MMQIHEIEAIKSLLASPKRITIIPHRNPDGDAMGSTLGLYHTLKQLNHEVTVIAPNEFPD
FLAWLPESNKVMIFERSFDTCKAILEKSELLFTLDFNALHRTGDQMENVLKTLSAPSIMI
DHHQAPDGYATYTFSDTNYGSTCEMVYDFIHQLGYENLINKTVATCLYTGIVTDSGSFRF
PKTTSATHKCVADLIDKGINNSEIHNLLFDNSSYNRLLLLGKALQNLKMLPEYKTTYITL
TQDELNEFGHQKGDTEGIVNYGLSIKGIDFTAIFIENKEEGIIKISFRSQGDFDVNQFAR
NHFNGGGHINAAGGKSFSNLEETIQQFIAILAKEKK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagatacacgaaattgaagctattaaatcgctattagcttcaccaaaaagaatt
acaattatacctcacagaaaccctgatggcgatgctatgggttctactttaggattatat
catacactaaaacagcttaaccatgaggttactgttatagctccaaatgaatttccagat
tttttagcatggttaccagaaagcaataaagtcatgatatttgaacgtagttttgatact
tgcaaagctattctagaaaaatcggaattattatttacattagatttcaatgcgcttcat
agaacaggagatcaaatggaaaatgttttaaaaaccctttcggctccaagtataatgatt
gatcatcatcaagctcctgatggttatgcaacttatactttttcagataccaattatggt
tctacttgcgaaatggtttacgattttattcaccaattaggttatgaaaacctaatcaac
aaaacagttgcaacatgtttgtatactgggattgtaactgattcaggaagtttccgtttc
ccaaaaacaacaagcgctactcacaaatgcgttgctgatttaatcgataaaggaattaac
aatagtgaaattcacaatctccttttcgataattcatcatacaatcgtttattattactt
ggtaaagcattacaaaatttaaaaatgcttccagaatataaaactacctacattacgtta
acccaagacgagcttaatgaatttggtcatcaaaaaggagacacagaaggtattgtaaat
tacggattaagtataaaaggcatcgattttactgccatttttattgaaaacaaagaagaa
ggaattattaaaatttctttccgatctcaaggtgattttgatgttaatcaatttgctcga
aatcattttaacggtggtggtcatatcaacgctgctggaggaaaatctttttcaaattta
gaagaaactatacaacaatttattgctattttagcaaaagaaaaaaaataa
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