Flavobacterium channae: LOS89_03650
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Entry
LOS89_03650 CDS
T08502
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
fcb
Flavobacterium channae
Pathway
fcb02024
Quorum sensing
fcb03060
Protein export
fcb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LOS89_03650 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOS89_03650 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOS89_03650 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fcb02044
]
LOS89_03650 (secDF)
Secretion system [BR:
fcb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LOS89_03650 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
TBPIP_C
Motif
Other DBs
NCBI-ProteinID:
UGS24374
LinkDB
All DBs
Position
840673..843597
Genome browser
AA seq
974 aa
AA seq
DB search
MQNRGLIKFFAIIFALVCVYQLSFTFVANSIVSDAKAFAKGDTAKELRYLDSIGKEKVYL
GHTYKEVTNNQINKGLDLEGGLNVILQISVKDVLKQLANDSKNPAFNKALADAKANQQGN
QDYIDAFFEAANAANVKLAAADVFGNRNLDEVIKFDMTNKQVEPIIKQKVQESVESAFKV
LRERIDKFGVTQPNIQLLGNSGRILVELPGAKDIDRIKKLLQSTAQLEFWETYKIEEIGQ
YLMSVEEALKKTEVAVKEAPAKTNSIDSLLTDKADTTAAAKNSPFLGKMLAPGQQGSPFV
GVFATKDTAAINAYFKRDDIKALLPANLTNVKFAWGKTNEKTPDQTELYALKGTRDNVAP
LSGGVIVDATDTFDQLGKPAVSMQMNGNGSRKWEQITGAVSQQGNAIAIVLDNIVYSAPG
VSKGAITGGRSEISGNFTIEETKDLANILRAGKLPAAAEIVQSEVVGPSLGQEAIDNGMI
SFVIGFALVLLWMVVYYGKTGFYANLALLVNILFIFGTLASFGAVLTLPGIAGIVLTIGM
AVDANVIIFERAKEELDSGKTVQEATDYAFTWKGAMSSIIDANVTTAITAIILLVFGTGP
IQGFATTLLIGIFTSVITAVFITRMFLDWSLSRNEKLAYSTSLTKTWFKNLNIDFLGKKK
IAYAISGILVALSIFSLVTKGLNQGVDFVGGRTYQVRFDKPVSAPEVTADLVAVFGSAEA
KVYGNTNQLKITTKYKIEDEGEGVDKEVNQKLYEGLKKYLPADLTYEKFANLYEGKTVGI
LSSGKVTGTISKDIKTNSLWAVLGSLFVVFAYLMISFRRWQFGFSAVVAVAHDVIIVLGI
FSFFYTILPFNMEIDQAFIAAILTVIGYSLNDTVIVFDRVREFLDYNSSPDFKGLVNKAL
NTTLSRTINTSATTLVVLVAIFIFGGETIRGFVFAILVGILVGTYSSLFIATPVMQDTIG
EKEGRKMAEFKKED
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatagaggactaattaaatttttcgcaattatctttgctttggtatgtgtatac
cagctttcttttactttcgtagcgaatagtattgtttctgatgcaaaagcttttgctaaa
ggagatactgctaaagaattacgctatttagattctatagggaaagaaaaagtatactta
ggtcatacttacaaagaagttacaaataaccaaataaacaaaggtcttgacttagaagga
ggattaaacgtaattcttcaaatttcagttaaagatgttttaaagcaattggctaacgat
tctaaaaatccagctttcaacaaagctttagctgatgcaaaagcaaatcaacaaggaaat
caagattatattgatgctttctttgaagctgcaaatgctgctaatgttaagttagctgct
gctgatgtttttggaaacagaaacttagatgaagtaatcaagtttgatatgactaacaaa
caagttgagccaatcatcaaacaaaaagttcaagaatctgtagaaagtgctttcaaagta
ttaagagagcgtatcgataaatttggagttactcaacctaatatccaattattaggaaat
tctggaagaattttagttgaattaccaggtgctaaagatattgaccgtattaagaaatta
ttacaaagtacggctcaattagagttctgggaaacttataaaatagaagaaatcgggcaa
tatttaatgtcagttgaagaggcattaaagaaaacagaagttgctgttaaagaagctcct
gcaaaaacaaatagtattgattcattattaactgataaagctgatactacagctgctgct
aagaatagtcctttcttaggtaaaatgttagctccaggtcagcaaggttctccgtttgta
ggtgtttttgctactaaagatactgctgcaatcaatgcttacttcaaaagagatgatatt
aaagcgttattacctgctaacttaactaatgttaaatttgcttggggaaaaacgaacgag
aaaactccagatcaaactgagttatatgcattaaaaggaacaagagataatgttgctcct
ttaagtggtggtgtaattgttgatgcaacagatacatttgaccaattaggtaagccagct
gtttctatgcaaatgaatggtaatggttcaagaaaatgggaacaaattacaggtgctgtt
tctcaacaaggaaatgcaattgcaattgttttagataatattgtgtattcagctcctgga
gttagtaaaggtgcaattactggtggtagatcagaaatttctggaaactttacaattgaa
gaaacaaaagacttagcaaacattttaagagctggtaaattacctgcagctgctgaaatt
gttcagtcagaagttgtaggaccatctttaggtcaagaagctattgataatggtatgatt
tcattcgttatcggatttgctcttgtattattatggatggtagtttactatggtaaaact
ggtttctatgctaacttagcgttattagtaaatattttattcatttttggaacattagca
agttttggtgctgtattaacattaccaggtatcgcaggtatcgtattaacaattggtatg
gcggtagatgctaacgtaatcatctttgaaagagctaaagaagaattagatagtggtaaa
acggttcaagaagcaactgattatgcatttacatggaaaggagctatgtcttctatcatc
gatgcaaacgttactactgcaattacagctatcatcttattagtatttggtacaggacca
attcaaggtttcgctactacattattaattggtatttttacttctgtaattacagctgta
ttcattacaagaatgttcttagattggagtttaagcagaaatgaaaaattagcttattct
acttcattaactaaaacttggttcaaaaacttaaatatcgatttcttaggtaaaaagaaa
attgcttacgctatttctggaatcttagttgctttgagtattttctcattagttactaaa
ggattaaaccaaggtgttgattttgtaggaggaagaacttaccaagtgcgtttcgataaa
cctgtttctgctccagaagttacagctgatttagttgctgtttttggaagtgctgaagca
aaagtttatggtaatacaaatcagttaaaaattactactaagtataaaattgaagacgaa
ggagaaggagtagataaagaagttaaccaaaaattatacgaaggattaaagaaatattta
cctgctgatttaacttacgagaaattcgctaatttatacgaaggtaaaacagttggaatt
ttatcttctggaaaagttactggtacaatttcaaaagatattaaaacaaactctttatgg
gcagttttaggatcgttattcgttgtatttgcttacttaatgattagtttccgtagatgg
cagtttggattctcagcagttgttgctgtagctcacgacgttatcattgtattaggtatt
ttctcattcttctatacaattttacctttcaatatggaaattgaccaagcgtttattgct
gcaattttaacggttattggatattcattaaatgatacggtaattgtatttgacagagtt
cgtgaattcttagactacaattcgtctccagactttaaaggattagtaaataaagcttta
aatactacattaagtagaacaattaatacttctgctacaacattagttgtattagttgca
atcttcatctttggaggtgaaactatcagaggtttcgtattcgctatcttagtaggtatt
ttagtaggaacttattcatctttattcattgcaactccggtaatgcaagatacaattggt
gaaaaagaaggtcgtaaaatggctgaattcaaaaaagaagactaa
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