Flavobacterium channae: LOS89_04020
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Entry
LOS89_04020 CDS
T08502
Name
(GenBank) THUMP domain-containing protein
KO
K25137
23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.173
]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcb03009
]
LOS89_04020
Enzymes [BR:
fcb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
LOS89_04020
Ribosome biogenesis [BR:
fcb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOS89_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
THUMP
RlmL_1st
Motif
Other DBs
NCBI-ProteinID:
UGS24446
LinkDB
All DBs
Position
929305..930465
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AA seq
386 aa
AA seq
DB search
MENFKMTAKTFFGFEEILAKELQMLGAQQVEIGTRVVSFKGDKGFMYKANLALRTALKIL
KPIKTFRAYNEKTLYDGIRSIDWSDYLTEHNTFLVETTLHSENFNHSQFVALKTKDAIVD
QFRDLNGKRPSIDKDFPDLQIHVHIDRDNVTVSLDSSGASLHHRGYRSATNIAPINEVLA
AGMLIMSGWDGKSHFLDPMCGSGTILAEAAMIACNIPTNINRKEFAFEKWNDWDAELFDD
ILESLLKKTREFHYTIKGYDKAPSAVSKAKDNVRNANLDEYISISNENFFDSKKETEGPL
HMVFNPPYGERLDIDMERFYREIGDTLKQNYSNTNAWFITANLDALKYVGLKPSRKIKLF
NGKLEARLVKYEMYEGSKKGKYLNDK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttaaaatgacggccaaaaccttttttggctttgaggaaatattagctaaa
gagttacaaatgctaggagctcaacaagtggaaattggtacacgtgttgtaagttttaaa
ggagataaaggttttatgtataaagccaatttagctctacgaacagcactaaaaatttta
aaaccaattaagacttttagagcttataacgaaaaaacattgtatgatggaatcagatcg
attgattggtcagattacctaacagaacacaatacatttttagttgaaactactttacat
tcagaaaatttcaatcacagtcagtttgttgcattaaagacaaaagacgctattgttgat
caatttagagatttaaatggaaaacgtccaagtatcgataaagattttccagatttacaa
attcacgtgcatattgacagagataatgtaacagtttccttagattcttcgggagcttcg
ttgcaccatagaggatacagaagtgctactaatattgccccaattaatgaagtattagca
gcaggaatgttaatcatgtcaggttgggatggaaaaagtcatttcttagatccaatgtgt
ggttctggaactatattagctgaagccgcgatgattgcttgtaatattccgactaacatt
aatagaaaagagtttgcgtttgaaaaatggaacgattgggatgcagaattatttgatgac
attttagaatcgttgttgaagaaaacacgcgaatttcattatacaattaaaggctacgat
aaagcgccaagtgctgtttctaaagcaaaagataatgttagaaatgccaatttagatgaa
tacattagtatttcaaatgaaaactttttcgattctaaaaaagaaacagaaggtccgttg
catatggtatttaatccaccttatggagaacgtttggatattgatatggaacgtttttat
agagaaattggcgatacattgaaacaaaattattctaataccaatgcatggttcataaca
gctaatttagatgcgttgaaatatgttggtttaaaaccaagtagaaaaattaaacttttc
aatggtaagctagaagcacgtttggtaaaatacgaaatgtatgaaggaagtaaaaaagga
aagtatttaaatgataagtaa
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