KEGG   Flavobacterium channae: LOS89_04065
Entry
LOS89_04065       CDS       T08502                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
fcb  Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:fcb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fcb02048]
    LOS89_04065
Enzymes [BR:fcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     LOS89_04065
Prokaryotic defense system [BR:fcb02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   LOS89_04065
SSDB
Motif
Pfam: ResIII DEAD YagJ SNF2-rel_dom SWI2_SNF2 T2SSE nSTAND3 AAA_22 RNA_helicase NPHP3_N Helicase_C
Other DBs
NCBI-ProteinID: UGS24455
LinkDB
Position
940692..942992
AA seq 766 aa
MIHLKNYQEEAVNDLTKNLYKLLKKPGARQNLIFKAPTGSGKTVMMASLLNKFCEELPER
YELEKRKAAFIWIAPNKLYIQSYNAMKGFFAEMRSIKPIFFEDVSNDELLPNEVLFVNWE
SINKEKNTMIKENETNKNLYSFINKAKLNDTEIIVIIDEEHMFANTKTAKRANEVLQKIY
PKVEIRVSATPTTSSDYRTLVERQDVIAEEMIKEGIILNPALDTIQQQGRSLEEILLEQA
LAKREELRQAYENLGVKINPLLLIQLPNDSSDNNTADDEKYIDIVLQNLEVKYNITVNNN
KLAVWLSGRKDNVADIEKPDNMVEVLLFKQAIALGWDCPRAGVLLIFRELKSTTFTIQTV
GRILRMPEQKHYPNPLLNQGYVFTNLSKNQIEIVQDDMSYITMNKARRIENYMPVYLDST
YINTRIVRNRLGAKFRTALYEIAELNWEVKREIGSDHFFEINKQLLKKRFINTDINTIEI
VIPENVLLTGEVETQLVTETARFAKTPSELARLFRDFCRSLTAPYAAVDSTPVLEGAMKY
FFEDYFGIIEYDAIKIMLFNDNQPIFIELIEKAKERYQEMQEEKANKATKDIQNYKWEVP
VERIYNELYDEKENVEKHALEPFYEYKRASSPEVRFAAYLEEQKENLHWWYKNGEKAKEH
FAVPYEDYLGKQSLFYVDFVILNKAGITCLFDTKTAGSDPANAHLKHNALIDFIAERNEK
GHKTIGGILIPKDNNGTTTWWYCKNKITNTKDTNGWDRFDPVNAKE
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgatacatttaaaaaattaccaagaagaagccgtaaacgaccttacgaaaaacctatat
aaattattaaaaaaaccaggtgcaagacaaaatttaattttcaaagcacccacaggttca
ggtaaaaccgtaatgatggcatcattacttaacaagttttgtgaagaattaccagaacgc
tatgaattagaaaaacgaaaagcagcttttatttggatagcacctaacaaattgtacatt
caaagttacaacgctatgaaaggcttttttgccgaaatgcgttccataaaacctattttc
tttgaagatgtttcaaatgatgaattactaccaaacgaagtgttgtttgtaaattgggaa
agcatcaataaagagaaaaacacgatgattaaagaaaatgaaaccaataaaaatctttat
agtttcattaataaagccaaattaaacgatacagaaatcattgtcattatagacgaagaa
cacatgtttgcgaatacaaaaacagcaaaacgtgccaatgaagtattacaaaaaatatat
ccaaaagtagaaattagggtatcggcaacacctacaactagtagtgattacagaactttg
gtagagcgtcaagacgttattgctgaagaaatgattaaagaaggaattattttaaatcca
gctttagataccatacaacaacaaggacgttcattagaagaaattttattagagcaagcg
ttagcaaaaagagaagaattacgtcaagcctatgaaaatttaggtgtaaaaatcaatcct
ttattgttaatccagttaccaaacgattctagtgataacaacacagccgatgatgaaaaa
tatatcgatatagtattacaaaacttagaagtcaaatacaatattaccgttaataataac
aaactagcggtgtggttatcagggagaaaagacaatgtagccgatattgaaaaaccagat
aatatggtggaagtattattattcaaacaagccatagctttaggttgggattgtcctcgt
gcaggagttcttttaatttttagagaattaaaaagtaccacattcacgattcaaacggta
ggtagaattttgcgtatgccggaacagaagcattatcctaatccattattaaatcaagga
tatgtttttaccaatttaagtaaaaatcaaatagaaatagttcaagatgatatgagttat
atcaccatgaacaaggctcgtagaattgaaaactacatgccagtttatttagattctact
tacatcaatactcgtattgttagaaatcgtttaggggcaaaatttagaactgctttgtat
gaaattgcagaattaaattgggaagtaaaaagagaaataggttcagaccattttttcgaa
atcaataagcaattactaaaaaagcgattcatcaacacggatattaataccatagaaatt
gtaattcctgaaaatgtattactaactggtgaggtggaaacacaattagttacagaaaca
gctcgttttgccaaaacgcctagtgaattagcgcgtttgtttagagatttttgtcgttca
ttaacggctccttatgcagcggtcgatagtactcctgttttagaaggagctatgaaatat
ttctttgaagattattttggtatcatcgagtatgatgctattaaaataatgttgtttaac
gataaccaacctattttcatcgagttaattgaaaaagcaaaggagcgttatcaagaaatg
caagaagaaaaagcaaacaaagccacaaaagatattcaaaattacaaatgggaagttcct
gttgaaagaatctataatgaattatatgatgaaaaagagaatgtagaaaaacatgcatta
gaacctttttatgaatacaaaagagcttcttcacctgaggttagatttgctgcatattta
gaggaacaaaaagaaaatctacattggtggtataaaaatggagaaaaagcaaaagagcac
tttgctgtaccttatgaggattatctaggcaaacaaagtttgttttatgttgattttgtg
atactaaataaagcgggaattacttgtttattcgataccaaaacagcaggtagtgaccca
gccaatgctcatttaaaacacaatgcactaatagattttattgcagaaagaaatgaaaaa
ggacataaaacaattggaggaatattaattcctaaagataataatggaacaacaacttgg
tggtattgtaaaaacaaaatcaccaatacaaaagatacgaacggttgggatagatttgac
cctgttaacgcaaaagaataa

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