Flavobacterium channae: LOS89_04655
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Entry
LOS89_04655 CDS
T08502
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00300
Lysine biosynthesis
fcb00470
D-Amino acid metabolism
fcb01100
Metabolic pathways
fcb01110
Biosynthesis of secondary metabolites
fcb01120
Microbial metabolism in diverse environments
fcb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOS89_04655 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOS89_04655 (lysA)
Enzymes [BR:
fcb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LOS89_04655 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
THSD1_N
Motif
Other DBs
NCBI-ProteinID:
UGS24566
LinkDB
All DBs
Position
complement(1054361..1055566)
Genome browser
AA seq
401 aa
AA seq
DB search
MKPEVLQQLATEFGSPLYVYDAEKIAFQYNRLQTAFSKVERFKVHYAVKALSNVSVLKYL
KSLGSGLDTVSIQEVQLGLLAGVDPKDIIYTPNGVSMEEIENVAALGVQINIDNLSILEQ
FGTKHPTIPVCIRINPHVMAGGNANISVGHIDSKFGISIHQLPHILRIIENTKMHINGIH
MHTGSDILDVEVFLYAAEILFETAKNFPELDFIDFGSGFKVPYKKGDIETNVEEFGRKLT
KRFLAFEKEYGRPLTLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPM
LYGSQHHIENISNPKGKERYYSVVGYICETDTFASNRRITEIHEGDILCFRNAGAYCFSM
ASNYNSRLKPAEVLWKDGTAHLIRERETFDDILKNQVIIEI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagaagtattacaacaattagcaacagaatttggaagtccgttatatgtttat
gatgcggaaaaaatagcttttcaatacaatcgtttacaaactgcttttagcaaggtggaa
cgttttaaggtacactatgcagtgaaagctttatctaatgtttctgttttgaagtaccta
aaaagtttaggttctggtttggatacggtttctattcaagaagtacaacttggattactt
gctggtgtagatcctaaagatattatttatacaccaaacggagtttctatggaagaaata
gaaaacgttgcagcattaggagttcaaatcaatattgacaacttgtctattttagagcaa
tttggtacaaaacaccctactattccagtttgtattcgtattaatcctcacgtaatggct
ggaggaaatgctaatatttctgtaggacatattgatagtaaatttggaatttcaattcat
caattaccacatattttaagaattattgaaaacactaaaatgcatatcaacggaattcat
atgcataccggttctgacattttagatgtagaagtgtttttatatgcagctgaaatctta
tttgaaaccgctaaaaatttcccagaattggatttcatcgattttggaagtggatttaaa
gtaccatacaaaaaaggtgatattgaaactaatgttgaagaatttggaagaaaattaacg
aaacgctttttagcattcgaaaaagaatatggaagaccgttaacactagcttttgaacca
gggaaatttttggtaagtgaagctggatatttcttagcaaaagtaaatgttgtaaaacaa
actacttcaacagtttttgctggaattgattcgggattcaaccatttaatcagacctatg
ttatatgggtcgcaacatcatattgaaaatatttctaatcctaaaggtaaagaacgctat
tattcggtagtaggatacatttgtgaaacggacacatttgctagcaaccgaagaattact
gaaatacacgaaggtgatattttatgctttagaaacgcaggcgcttattgcttttcaatg
gcatctaactacaactcacgactaaaaccagccgaagttttatggaaagacggaacggct
cacttaatcagagagcgtgaaacgtttgacgatattttgaaaaatcaagttattattgaa
atttag
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