Flavobacterium channae: LOS89_05095
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Entry
LOS89_05095 CDS
T08502
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
fcb
Flavobacterium channae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA
AAA_5
AAA_16
AAA_7
AAA_14
FleQ
AAA_22
AAA_3
AAA_18
AAA_19
T3S_SPI-1_N0
Motif
Other DBs
NCBI-ProteinID:
UGS24653
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Position
1136183..1137346
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AA seq
387 aa
AA seq
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MSKILVIEDEAAIRRVLVKILSEENDSYKVEEAEDGLQGVEKVKNDDYDLILCDIKMPKM
DGVEVLEAVKKIKPEIPMVMISGHGDLETAINTMRLGAFDYISKPPDLNRLLNTVRNALD
KKQLVVENKILKKKVSKNYEMIGNSEAINHIKTMIDKVAPTDARVLITGPNGTGKELVAH
QLHERSERASAPIIEVNCAAIPSELIESELFGHVKGAFTSAVKDRAGKFEAADGGTIFLD
EIGDMSLPAQAKVLRALQENLIQRVGADKDIKVNVRVVAATNKDLKKEIEEGRFREDLYH
RLAVILIKVPALNDRRDDIPELIEHFALKIASEQGNTAKTFSKSAIKLLQEYDWTGNIRE
LRNVVERLIILGGNEISEQDVKLFASK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatattagttatagaagacgaagcagcaatcagaagagtattggttaaaata
ctttctgaggaaaatgattcgtacaaagtagaagaagcagaagacggtttacaaggagtt
gaaaaagtcaaaaatgacgattacgatttaattctttgtgatattaaaatgccaaaaatg
gatggtgttgaggtattggaagctgtaaaaaaaataaagccagaaatcccaatggtcatg
atttcaggtcatggcgatttagaaacagctattaatacaatgcgtttaggtgcttttgat
tatatttcaaaaccaccagatttgaatcgtttgttaaacacggttcgaaatgcattagat
aaaaaacaattggtagttgagaataaaatcttgaaaaagaaagtttctaaaaactacgaa
atgattggtaatagcgaagcaattaatcatattaaaacgatgattgataaagttgctcca
acagatgctcgtgtattgattactggtccaaatggaactggaaaagagttggtagcacat
caacttcatgaaagaagcgaacgtgcatctgctcccattattgaggtgaattgcgcagct
attccgtctgaattaatagaaagtgaattatttggtcatgtaaaaggagcatttacttct
gctgttaaagatagagctggaaagtttgaagctgccgatggtggaaccattttcctggat
gagattggtgatatgagtttgccagctcaagcaaaagtgttacgtgctttacaagagaat
ttaattcaacgtgttggtgctgataaagacattaaagttaatgttagagttgtggcagca
acaaataaagatttgaaaaaagaaatcgaagaaggacgatttagagaagacttatatcat
cgtttagcggttattttaattaaagttcctgcgttaaatgatagaagagatgatattcca
gaattgattgagcattttgctttaaaaattgcttctgagcaaggaaatacagcaaaaaca
ttttcaaaatcggccatcaaattattacaagaatacgattggacaggaaacattagagaa
ttaagaaatgtagtagaacgcttaattattttaggcggaaacgaaatttcggagcaagat
gtaaaactgtttgcaagtaaataa
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