Flavobacterium channae: LOS89_05210
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Entry
LOS89_05210 CDS
T08502
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00541
Biosynthesis of various nucleotide sugars
fcb01100
Metabolic pathways
fcb01250
Biosynthesis of nucleotide sugars
Module
fcb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LOS89_05210 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fcb01005
]
LOS89_05210 (kdsA)
Enzymes [BR:
fcb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LOS89_05210 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
fcb01005
]
Lipid A
LOS89_05210 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
DUF5091
Lactonase
Motif
Other DBs
NCBI-ProteinID:
UGS24676
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Position
complement(1161787..1162605)
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AA seq
272 aa
AA seq
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MNLQNIPQIKHTESGNFFLLAGPCAIEGEEMAMRIAEKIVSVTHKLQIPYVFKGSFKKAN
RSRVDSFTGIGDEKALKILQKVSREFGVPTVTDIHTNEDAVMAAEYVDVLQIPAFLVRQT
DLVVAAANTGKTVNLKKGQFMSPESMKHAVQKVLDSNNENVMVTDRGTMFGYQDMIVDFR
GIPTMKQYATTVLDVTHSLQQPNQTIGVTGGRPDMIETIAKAGIAVGVDGIFIETHFDPA
NAKSDGANMLHLDYFEDLMTKLVAIRKTVNQF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaaaacattccacaaataaaacatactgaaagcggtaacttttttctacta
gcaggtccttgtgccatagaaggagaagaaatggcaatgcgaattgcagaaaaaatcgtt
tcagtaacccataaacttcaaattccttacgtttttaagggatcatttaaaaaagcaaac
cgttcaagagtagatagttttactggaattggtgatgaaaaagcattaaaaattctacaa
aaagtatctagagagtttggtgttccaacagtaactgacattcatacaaacgaagatgcc
gtgatggcagcagaatatgtagatgtgttacaaataccagcatttcttgttcgtcaaaca
gatttagtagttgcggctgccaatacaggtaaaactgtaaatcttaaaaaaggacaattt
atgagtcctgaaagcatgaaacatgcggttcaaaaagttcttgatagcaacaatgaaaat
gtaatggtaactgatagaggaactatgtttggttatcaagatatgattgtagatttcaga
ggaattccaactatgaaacaatatgccacaacagttttagacgttacgcattcattacaa
caacctaaccaaacaattggagtaactggaggtcgtcctgatatgattgaaactattgct
aaagcaggaattgctgttggtgttgacggaattttcattgagactcattttgatcctgct
aatgctaaaagtgatggcgcaaatatgttgcatttagactattttgaagacttaatgact
aagctagttgccatcagaaaaaccgtaaatcaattttaa
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