KEGG   Flavobacterium channae: LOS89_06305
Entry
LOS89_06305       CDS       T08502                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fcb  Flavobacterium channae
Pathway
fcb03030  DNA replication
fcb03430  Mismatch repair
fcb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOS89_06305
   03430 Mismatch repair
    LOS89_06305
   03440 Homologous recombination
    LOS89_06305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcb03032]
    LOS89_06305
   03400 DNA repair and recombination proteins [BR:fcb03400]
    LOS89_06305
Enzymes [BR:fcb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOS89_06305
DNA replication proteins [BR:fcb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LOS89_06305
DNA repair and recombination proteins [BR:fcb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LOS89_06305
SSDB
Motif
Pfam: RNase_T DEDDh_C DNA_pol_A_exo1 RNase_H_2 CAF1 DNApol_Exo
Other DBs
NCBI-ProteinID: UGS24880
LinkDB
Position
complement(1374496..1375104)
AA seq 202 aa
MKFNWFKKIVKDYPKFWETYLSYFDGNQSKPNRYVVFDCETTGLDYKSDRILSIGAVAIQ
NNQIIVGDFMEVFLQQDVFKAESVPIHGILREGKEEKIVEAEAVIRFLDFIKDATLVGHH
VDFDIEMINQALNRLDVGKLENQAMDTDVMYQKLKYLPQEQHSSLDELCDIYKIKKSDRH
TASGDAFITALLFLKLKKKLEI
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaagttcaattggttcaaaaaaatagtaaaagattatcctaaattttgggaaacgtat
ttgagttattttgatggaaatcagagtaaaccaaatagatatgtagtttttgattgcgaa
actactggtttggattataaatcggaccgaattttatctattggtgcagttgccattcaa
aataaccaaattattgtaggtgattttatggaagtttttttacaacaagacgtttttaaa
gcagaatctgtgcctatccatgggattttaagagaaggaaaagaagaaaagattgttgaa
gcagaagccgttattcgttttttagatttcataaaagatgctacgcttgttggtcatcat
gttgattttgatattgaaatgattaatcaagccttaaatcgtttggatgttggtaaactt
gaaaatcaggctatggatactgatgttatgtatcaaaaattgaaatatttaccacaagaa
caacacagttcgctcgatgagttgtgtgatatttataaaataaaaaaatcggaccgacac
accgcaagtggtgatgcttttataacagctttattgtttttaaaacttaaaaagaaactc
gaaatttaa

DBGET integrated database retrieval system