Flavobacterium channae: LOS89_07480
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Entry
LOS89_07480 CDS
T08502
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcb03400
]
LOS89_07480
Enzymes [BR:
fcb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LOS89_07480
DNA repair and recombination proteins [BR:
fcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LOS89_07480
Prokaryotic type
LOS89_07480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UGS22619
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Position
1620861..1622147
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AA seq
428 aa
AA seq
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MTIFWFRRDLRLDDNIGLFHALNSNEEVLPIFIFDENILSQLSKNDARVTFIHEQLDKMQ
SELNKLGKSLAVFHGKPVDIFEKLISENKITSVYTNHDYEPYARKRDKEMNQLFLSKGIN
FLTSKDQVIFEKSEVVKEDGSPYVVYTPYSKKWKENFRKIKLVHYPSEEKLDKITKHSYP
FLSLSDIGFEKSDIKITPFDVSATLIQNYEATRNFPALNKTSFLGIYLRFGAVSIRKMIQ
KAIAEKNETFWNELIWREFFMQILWHFPNTSKNSFKVKYDAIKWKNNEENFKKWCNGKTG
YPFVDAGMRELNATGHMHNRVRMIVASFLCKHLLIDWRWGEAYFAQNLLDYEMASNVGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDKDFKYIKKWIPELETEYYPKPIVDHKEARERCL
KVYKEAVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactattttttggtttagacgcgatttacgattggatgataatattggactttttcat
gctttaaatagtaatgaagaagtattgcctatatttatttttgatgaaaacattttatct
caattgtcaaaaaatgatgctcgtgttacttttattcatgaacagttagataaaatgcag
tcagagttgaataaactcggaaaatcattagctgtttttcatgggaaaccagtcgatata
tttgaaaaactaatttcagaaaataaaattacgtctgtttatacgaatcatgattacgaa
ccttatgctcgcaagcgtgacaaagaaatgaatcaattatttctttcaaaaggaatcaac
tttttaacttctaaagatcaagttatttttgaaaaaagcgaagtagttaaagaagacggt
agtccttatgtagtttatacaccatattccaaaaaatggaaagaaaatttcagaaaaatt
aagcttgttcattatccttctgaagaaaaattagataaaattacgaaacactcctaccct
tttttatcattatcggatattggttttgaaaaatcagatataaaaataacaccatttgat
gtttcagcaacgcttattcaaaattatgaagcaacaagaaattttccagcattaaataaa
acttcatttttaggaatttatcttcgttttggtgcagtttccattcgaaaaatgatacaa
aaagccattgcggagaaaaatgaaacgttttggaatgaattgatttggcgcgaatttttc
atgcaaattttatggcacttcccaaatacatctaaaaatagcttcaaggtaaaatatgat
gctattaaatggaaaaataatgaagaaaacttcaaaaaatggtgcaatggaaaaacaggt
tatccttttgtagatgccggaatgcgggaattaaacgcaacaggccacatgcacaatcgc
gtacgcatgattgttgcaagctttttatgcaagcatttacttatcgattggcgttggggt
gaagcgtattttgctcaaaatttattagactacgaaatggcgagtaatgttggaaattgg
caatgggctgcaggttcaggtgttgatgccgctccttactttcgaatttttaatccaaca
gaacaaattaaaaaatttgataaagattttaaatacataaaaaaatggattccagaattg
gaaaccgaatattatccaaaaccaattgtagatcataaagaagcgagagaacgttgttta
aaagtctacaaagaagcagttggataa
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