Flavobacterium channae: LOS89_08250
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Entry
LOS89_08250 CDS
T08502
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00260
Glycine, serine and threonine metabolism
fcb00460
Cyanoamino acid metabolism
fcb00630
Glyoxylate and dicarboxylate metabolism
fcb00670
One carbon pool by folate
fcb00680
Methane metabolism
fcb01100
Metabolic pathways
fcb01110
Biosynthesis of secondary metabolites
fcb01120
Microbial metabolism in diverse environments
fcb01200
Carbon metabolism
fcb01230
Biosynthesis of amino acids
fcb01240
Biosynthesis of cofactors
fcb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOS89_08250
09102 Energy metabolism
00680 Methane metabolism
LOS89_08250
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOS89_08250
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LOS89_08250
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LOS89_08250
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LOS89_08250
Enzymes [BR:
fcb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LOS89_08250
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
HEAT_SCC3-SA
Motif
Other DBs
NCBI-ProteinID:
UGS22768
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Position
complement(1785064..1786338)
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AA seq
424 aa
AA seq
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MQRDEQIFDLILDEQDRQIHGIELIASENFVSDQVMEAAGSCLTNKYAEGYPGKRYYGGC
EVVDIVEQIAIDRAKALFGAEYVNVQPHSGSQANTAVFAACLKPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVEEETGVLNYDKIQEIATANKPKMIIAGASAYSRDMDFKRFR
EIADSVGALLLADISHPAGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGMIMMGKDFEN
PWGLTTPKGEIRMMSHVLDMSVFPGNQGGPLMHIIAAKAVAFGECLTDEFFRYAMQVKKN
AQAMAEAFNRRGYKLISGGTDNHMMLIDLRNKGISGKDAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLVEEDMETVVALIDKVLMNHTDEAVLEQVAEEVNDLMSERA
MFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaatttttgacctaattcttgacgaacaagatagacaaattcac
ggaattgaattaattgcttctgaaaactttgttagcgaccaagtaatggaagcggcaggt
tcatgtttaaccaacaaatacgctgaaggatatcctggtaaaagatattacggaggatgt
gaagtagtagatattgtagaacaaattgcaattgacagagcaaaagctttatttggagct
gaatatgtaaacgttcaacctcactcgggttctcaggcgaatacagccgtttttgcagct
tgtttaaaacctggcgatactattttaggatttgatttatcacatggtggtcatttaaca
catggttctccagttaacttttcagggaaattatacaatccagtattttatggggtagaa
gaggagacaggtgttttaaactatgataaaatccaagaaatagcaacagcaaacaaacca
aaaatgattatcgcaggagcttcagcttattctcgtgatatggattttaaacgtttcaga
gaaattgctgatagcgttggtgctttattattagcggatatttcgcacccagcaggatta
attgctaaaggtttattgaatgacccaattccacattgtcatattgtaactacaactact
cacaagacattaagaggtccaagaggaggtatgattatgatggggaaagatttcgaaaat
ccttggggattaactactccaaaaggagaaatcagaatgatgtcgcatgttttagatatg
tcggtttttccaggaaatcaaggtggacctttgatgcatattattgctgctaaagcggtg
gcgtttggagaatgtttgacggatgagtttttccgttatgcgatgcaggtgaagaaaaat
gcacaggcaatggcagaagcatttaacagaagaggatacaaattaatttctggtggtact
gataatcacatgatgttaatcgatttaagaaataaaggaatttcaggtaaagatgcagaa
aatgcattggtaaaagctgaaattactgtaaataaaaacatggtgccgtttgatgataaa
tcaccatttgttacttcgggtattcgtgtgggaactccagctatcacaacacgtggttta
gtggaagaagatatggagactgttgtagctttaattgataaagttttaatgaatcatact
gatgaagctgttttagaacaagttgcggaagaagttaatgatttaatgagcgaaagagca
atgtttgttttttaa
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