Flavobacterium channae: LOS89_08565
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Entry
LOS89_08565 CDS
T08502
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00280
Valine, leucine and isoleucine degradation
fcb00650
Butanoate metabolism
fcb00907
Pinene, camphor and geraniol degradation
fcb01100
Metabolic pathways
fcb01120
Microbial metabolism in diverse environments
fcb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LOS89_08565
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LOS89_08565
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LOS89_08565
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOS89_08565
Enzymes [BR:
fcb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LOS89_08565
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
UGS22829
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All DBs
Position
complement(1853585..1854448)
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AA seq
287 aa
AA seq
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MNEIKIIECPRDAMQGIKPFIPTEKKVKYIQSLLRVGFDTIDFGSFVSPKAIPQMQDTVE
VLAQLDLSATNSKLLAIIANTQGAQNASVHKEIQYLGFPFSISENFQMRNTHKTIAESLV
TLQEILEIADKSNKEVVTYISMGFGNPYGDPWNVEIVGEWTEKLANMGVKILSLSDTVGS
STPEVIDYLFSNLIPKYPNIEFGAHLHTTPDKWFEKIDAAYNAGCRRYDGAIQGFGGCPM
AKDDLTGNMPTEKLLSYFTTKRENTNTSPMSFESAYNEATKLFGEFH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcaaaattatcgagtgtccgcgcgatgccatgcaaggtatcaaaccgttt
attcctactgaaaaaaaggtaaaatacatccaatcgttattgcgtgtaggctttgatact
attgattttggaagttttgtttcgccaaaagcgattccgcaaatgcaagatacggttgag
gttttggctcaattggatttgtctgctaccaacagcaaattattagcgattattgccaat
acacaaggtgcacaaaatgcttctgttcataaagaaattcaatatttaggttttcctttt
tcgatttcggagaactttcaaatgcgaaatacgcacaaaacgattgctgaaagtttggtg
acacttcaagagattttagaaatcgctgataaatcgaataaggaagtggttacctatatt
tcaatggggtttggaaatccgtatggagatccatggaatgttgaaattgttggcgaatgg
acagaaaaattggcgaatatgggtgtgaaaatcctttcgctttcggataccgttggaagt
tccactccagaagtaattgattacttattttctaatttgattccgaaatatccaaacatc
gaatttggtgcgcatcttcatactacgccagacaaatggtttgaaaaaattgatgcggct
tacaatgcaggttgtcgtcgttatgatggcgccattcaaggttttggcggttgtcctatg
gcaaaagacgatttaacaggaaacatgcctacggagaaattattatcgtatttcactacc
aaaagagaaaatacgaatacgagtccaatgagttttgaaagtgcttataatgaagcgact
aagttatttggtgaatttcattaa
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